RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 PCDHB1Q9Y5F3 818 aa13.69□□□□□ -0.22
CHD3-209ENST00000473376 ACTL7AQ9Y615 435 aa13.69□□□□□ -0.22
CHD3-209ENST00000473376 CCP110O43303 1012 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 NEBLO76041 1014 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 ANXA6P08133 673 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 HOXC4P09017 264 aaPredicted RBP13.68□□□□□ -0.22
CHD3-209ENST00000473376 TGM2P21980 687 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 GKP32189 559 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 IGFALSP35858 605 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 KLK7P49862 253 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 HK3P52790 923 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 EIF3IQ13347 325 aaKnown RBP13.68□□□□□ -0.22
CHD3-209ENST00000473376 RFTN1Q14699 578 aaPredicted RBP13.68□□□□□ -0.22
CHD3-209ENST00000473376 LRRC14Q15048 493 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 PRRT3Q5FWE3 981 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 TMCO4Q5TGY1 634 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 ACAD10Q6JQN1 1059 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 ERAP2Q6P179 960 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 OR6K2Q8NGY2 324 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 LMX1AQ8TE12 382 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 FNIP1Q8TF40 1166 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 CRELD1Q96HD1 420 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 PDFQ9HBH1 243 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 KCTD5Q9NXV2 234 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 UBA2Q9UBT2 640 aaPredicted RBP13.68□□□□□ -0.22
CHD3-209ENST00000473376 GGT7Q9UJ14 662 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 RAI2Q9Y5P3 530 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 DGKBQ9Y6T7 804 aa13.68□□□□□ -0.22
CHD3-209ENST00000473376 SMG1Q96Q15 3661 aaKnown RBP13.68□□□□□ -0.22
CHD3-209ENST00000473376 A0A1W2PQ67 120 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 CDRT15L2A8MXV6 281 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 NTN3O00634 580 aaPredicted RBP13.67□□□□□ -0.22
CHD3-209ENST00000473376 YY2O15391 372 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 PRAMEF11O60813 436 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 MMP20O60882 483 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 GCATO75600 419 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 MPOP05164 745 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 XPAP23025 273 aaPredicted RBP13.67□□□□□ -0.22
CHD3-209ENST00000473376 RBMS1P29558 406 aaKnown RBP13.67□□□□□ -0.22
CHD3-209ENST00000473376 HCAR3P49019 387 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 POLR2LP62875 67 aaKnown RBP13.67□□□□□ -0.22
CHD3-209ENST00000473376 UBXN1Q04323 297 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 MTM1Q13496 603 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 CYTH1Q15438 398 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 CDKN3Q16667 212 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 TPRG1LQ5T0D9 272 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 ATXN7L2Q5T6C5 722 aaPredicted RBP13.67□□□□□ -0.22
CHD3-209ENST00000473376 FAXCQ5TGI0 409 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 GUSBP11Q6P575 273 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 DCUN1D2Q6PH85 259 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 SASS6Q6UVJ0 657 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 EFL1Q7Z2Z2 1120 aaKnown RBP13.67□□□□□ -0.22
CHD3-209ENST00000473376 CLEC14AQ86T13 490 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 MCOLN2Q8IZK6 566 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 ARL14Q8N4G2 192 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 ARL10Q8N8L6 244 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 WDR36Q8NI36 951 aaKnown RBP13.67□□□□□ -0.22
CHD3-209ENST00000473376 HMCESQ96FZ2 354 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 LIN37Q96GY3 246 aaPredicted RBP13.67□□□□□ -0.22
CHD3-209ENST00000473376 SYT11Q9BT88 431 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 LRRC61Q9BV99 259 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 LHX3Q9UBR4 397 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 PADI4Q9UM07 663 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 ITM2BQ9Y287 266 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
CHD3-209ENST00000473376 CPED1A4D0V7 1026 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 TNFRSF10CO14798 259 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 CREB3O43889 395 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 RASGRP1O95267 797 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 GZMAP12544 262 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 PNLIPP16233 465 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 TSHRP16473 764 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 ADKP55263 362 aaKnown RBP13.66□□□□□ -0.22
CHD3-209ENST00000473376 TPI1P60174 286 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 RPL7AP62424 266 aaKnown RBP13.66□□□□□ -0.22
CHD3-209ENST00000473376 CCDC173Q0VFZ6 552 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 NFATC4Q14934 902 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 STX1AQ16623 288 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 DEFB133Q30KQ1 61 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 AFMIDQ63HM1 303 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 PLEKHA7Q6IQ23 1121 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 SCYL2Q6P3W7 929 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 APTXQ7Z2E3 356 aaKnown RBP13.66□□□□□ -0.22
CHD3-209ENST00000473376 IRF2BP2Q7Z5L9 587 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 VPS36Q86VN1 386 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 GKN2Q86XP6 184 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 ZNF354CQ86Y25 554 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 SLC35F3Q8IY50 421 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 PYROXD2Q8N2H3 581 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 LZTR1Q8N653 840 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 KCNE4Q8WWG9 221 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 TMEM159Q96B96 161 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 ECHDC3Q96DC8 303 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
CHD3-209ENST00000473376 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
CHD3-209ENST00000473376 MAGEB5Q9BZ81 275 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms