RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 SARDHQ9UL12 918 aa12.66□□□□□ -0.38
TRAPPC12-217ENST00000473348 PPM1HQ9ULR3 514 aa12.66□□□□□ -0.38
TRAPPC12-217ENST00000473348 SHOC2Q9UQ13 582 aa12.66□□□□□ -0.38
TRAPPC12-217ENST00000473348 CHKBQ9Y259 395 aa12.66□□□□□ -0.38
TRAPPC12-217ENST00000473348 PCDHB9Q9Y5E1 797 aa12.66□□□□□ -0.38
TRAPPC12-217ENST00000473348 CACNA1IQ9P0X4 2223 aa12.66□□□□□ -0.38
TRAPPC12-217ENST00000473348 TCRBV21S2A2A0A5A6 115 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 TRAFD1O14545 582 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 HTRA2O43464 458 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 FZD6O60353 706 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 RNASEH1O60930 286 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 SUN1O94901 812 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 PGLSO95336 258 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 NDST3O95803 873 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ADH1BP00325 375 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 CPP00450 1065 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 PDHA1P08559 390 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 AOC1P19801 751 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ITIH2P19823 946 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ADRA1AP35348 466 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 CHRNA4P43681 627 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 DGKEP52429 567 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 DRG2P55039 364 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 RPS14P62263 151 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 CDK16Q00536 496 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 SATB1Q01826 763 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 CDK18Q07002 472 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 CST6Q15828 149 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ERCC6LQ2NKX8 1250 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ZNF805Q5CZA5 627 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 FAM46CQ5VWP2 391 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 NAPEPLDQ6IQ20 393 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 HIBCHQ6NVY1 386 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 PPP1R21Q6ZMI0 780 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 LINC00523Q86TU6 105 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 IFT20Q8IY31 132 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 LPCAT1Q8NF37 534 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ARRDC3Q96B67 414 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ECHDC3Q96DC8 303 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 TRIB3Q96RU7 358 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 EPC1Q9H2F5 836 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ANKZF1Q9H8Y5 726 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 POLMQ9NP87 494 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 GDF3Q9NR23 364 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 C2orf42Q9NWW7 574 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ARIH1Q9Y4X5 557 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 ZDBF2Q9HCK1 2354 aa12.65□□□□□ -0.38
TRAPPC12-217ENST00000473348 TP53BP1Q12888 1972 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 LOC285095A0A1B0GVY8 99 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 TSPAN11A1L157 253 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 SMAPO00193 183 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 MID1O15344 667 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 TP73O15350 636 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 AGTP01019 485 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 PRLP01236 227 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 EPOP01588 193 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 FGF1P05230 155 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 ATXN1LP0C7T5 689 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 HLA-DPA1P20036 260 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 ITGB7P26010 798 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 GRIA1P42261 906 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 MAGEA9P43362 315 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 GRIA4P48058 902 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 METAP1P53582 386 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 EPHB1P54762 984 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.397e-7■■■□□ 15.5
TRAPPC12-217ENST00000473348 SLC1A5Q15758 541 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 SIRPB2Q5JXA9 342 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 ZDHHC24Q6UX98 284 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 RANBP10Q6VN20 620 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 ZNF534Q76KX8 674 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 PARS2Q7L3T8 475 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 ZSWIM9Q86XI8 627 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 TMPRSS6Q8IU80 811 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 MCUQ8NE86 351 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 OR52K1Q8NGK4 314 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 ART4Q93070 314 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 RMDN1Q96DB5 314 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 PPP1R16AQ96I34 528 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 IER2Q9BTL4 223 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 ADGRE3Q9BY15 652 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 MKRN2Q9H000 416 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 SLC6A17Q9H1V8 727 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 DYRK4Q9NR20 520 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 PLXNB3Q9ULL4 1909 aa12.64□□□□□ -0.39
TRAPPC12-217ENST00000473348 A0A1W2PQ67 120 aa12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 C16orf96A6NNT2 1141 aa12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 PI15O43692 258 aa12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 DNTTP04053 509 aa12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 GABRG2P18507 467 aa12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 NDUFV2P19404 249 aa12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 C5AR1P21730 350 aa12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 SLC8A1P32418 973 aa12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 CARSP49589 748 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-217ENST00000473348 PLTPP55058 493 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms