RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 AREL1O15033 823 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 SLC7A4O43246 635 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 LATO43561 262 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 TRIM16O95361 564 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 PRKCGP05129 697 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 HLA-DQB2P05538 268 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 MMP13P45452 471 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 SCNN1BP51168 640 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 IRX4P78413 519 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 SEMG2Q02383 582 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 NIPAL4Q0D2K0 466 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
TPM3-216ENST00000473036 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 SEL1L3Q68CR1 1132 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 LAYNQ6UX15 382 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 PEX26Q7Z412 305 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 LRRC49Q8IUZ0 686 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 REXO1L1PQ8IX06 675 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 ZCCHC9Q8N567 271 aaKnown RBP13.25□□□□□ -0.29
TPM3-216ENST00000473036 TRIM58Q8NG06 486 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 ARRDC2Q8TBH0 407 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 KLK6Q92876 244 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 FOXJ1Q92949 421 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 ECHDC3Q96DC8 303 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 SMIM14Q96QK8 99 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 IL12RB2Q99665 862 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 MAK16Q9BXY0 300 aaKnown RBP13.25□□□□□ -0.29
TPM3-216ENST00000473036 CEP41Q9BYV8 373 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 PCED1AQ9H1Q7 454 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 SUV39H2Q9H5I1 410 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 C10orf88Q9H8K7 445 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 CAPN10Q9HC96 672 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 NT5MQ9NPB1 228 aa13.25□□□□□ -0.29
TPM3-216ENST00000473036 ASCC3Q8N3C0 2202 aaKnown RBP13.25□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3DA0A087WVF3 549 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3IA0A087WXS9 549 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3EA0A087X179 549 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3KA0A087X1G2 549 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TCRBV7S2A1N4TA0A589 114 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3FA6NER0 549 aaPredicted RBP13.24□□□□□ -0.29
TPM3-216ENST00000473036 SRRM3A6NNA2 597 aaPredicted RBP13.24□□□□□ -0.29
TPM3-216ENST00000473036 MEI4A8MW99 385 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3LB9A6J9 549 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 RNGTTO60942 597 aaKnown RBP13.24□□□□□ -0.29
TPM3-216ENST00000473036 WNT1P04628 370 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 MMP2P08253 660 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3HP0C7X1 549 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 CCNB1P14635 433 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 MAT2AP31153 395 aaKnown RBP13.24□□□□□ -0.29
TPM3-216ENST00000473036 PTPN7P35236 360 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 CCR5P51681 352 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 NEK3P51956 506 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 RWDD2BP57060 319 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TRAF2Q12933 501 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 PRKD1Q15139 912 aaPredicted RBP13.24□□□□□ -0.29
TPM3-216ENST00000473036 PTPRRQ15256 657 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 ZNF284Q2VY69 593 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TMEM259Q4ZIN3 620 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 MARC1Q5VT66 337 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3GQ6DHY5 549 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 ALG1LQ6GMV1 187 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3CQ6IPX1 549 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 SLC23A3Q6PIS1 610 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 BBS12Q6ZW61 710 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 CCDC50Q8IVM0 306 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 CCDC13Q8IYE1 715 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 RGL4Q8IZJ4 473 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
TPM3-216ENST00000473036 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.24□□□□□ -0.29
TPM3-216ENST00000473036 RBM41Q96IZ5 413 aaKnown RBP13.24□□□□□ -0.29
TPM3-216ENST00000473036 SLC6A18Q96N87 628 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 NUDCD1Q96RS6 583 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 FAM118BQ9BPY3 351 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 SCNM1Q9BWG6 230 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 OSBPL1AQ9BXW6 950 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 OSBPL8Q9BZF1 889 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 CAAP1Q9H8G2 361 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 RBM22Q9NW64 420 aaKnown RBP eCLIP13.24□□□□□ -0.29
TPM3-216ENST00000473036 DKK3Q9UBP4 350 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 CA5BQ9Y2D0 317 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 ATP8A1Q9Y2Q0 1164 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 MSRB2Q9Y3D2 182 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 PCDHGC4Q9Y5F7 938 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 AKAP13Q12802 2813 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 CABIN1Q9Y6J0 2220 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 ITPR1Q14643 2758 aa13.24□□□□□ -0.29
TPM3-216ENST00000473036 NBEAQ8NFP9 2946 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 A0A1W2PPC4 97 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 A0A1W2PQU0 124 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 FAM221BA6H8Z2 402 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 LRRC72A6NJI9 287 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 GIPC1O14908 333 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 HTRA2O43464 458 aaPredicted RBP13.23□□□□□ -0.29
TPM3-216ENST00000473036 AP1G1O43747 822 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 JCHAINP01591 159 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 ZFXP17010 805 aaPredicted RBP13.23□□□□□ -0.29
TPM3-216ENST00000473036 MX2P20592 715 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 TGM2P21980 687 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 CD27P26842 260 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 IFI35P80217 286 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms