RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 LZTS3O60299 673 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-210ENST00000472880 ATP1A3P13637 1013 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 TNFAIP3P21580 790 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 TGM2P21980 687 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 PSMA2P25787 234 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 LSSP48449 732 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 NDST2P52849 883 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 ADKP55263 362 aaKnown RBP19.95■□□□□ 0.78
COL9A3-210ENST00000472880 PPARDQ03181 441 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 LRRC14Q15048 493 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 ISXQ2M1V0 245 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 TMEM52BQ4KMG9 183 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 C6orf132Q5T0Z8 1188 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 CCDC183Q5T5S1 534 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 ERAP2Q6P179 960 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 SPACA3Q8IXA5 215 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 TPCN2Q8NHX9 752 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 HCAR2Q8TDS4 363 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 CELF6Q96J87 481 aaKnown RBP19.95■□□□□ 0.78
COL9A3-210ENST00000472880 VCPIP1Q96JH7 1222 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 BOCQ9BWV1 1114 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 HSD3B7Q9H2F3 369 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 SUV39H2Q9H5I1 410 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 DHX35Q9H5Z1 703 aaKnown RBP19.95■□□□□ 0.78
COL9A3-210ENST00000472880 LRRC19Q9H756 370 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 POLR1BQ9H9Y6 1135 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 PDFQ9HBH1 243 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 PARVAQ9NVD7 372 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 TAS2R14Q9NYV8 317 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 MYO6Q9UM54 1294 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 COQ6Q9Y2Z9 468 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 TSPAN11A1L157 253 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 ARHGAP42A6NI28 874 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 TMCO5BA8MYB1 307 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 EIF3CLB5ME19 914 aaKnown RBP19.94■□□□□ 0.78
COL9A3-210ENST00000472880 J3KR12 359 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 EEF2KO00418 725 aaKnown RBP19.94■□□□□ 0.78
COL9A3-210ENST00000472880 ATMINO43313 823 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-210ENST00000472880 PRAMEF11O60813 436 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 GCATO75600 419 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 DXOO77932 396 aaKnown RBP19.94■□□□□ 0.78
COL9A3-210ENST00000472880 MBD3O95983 291 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 C6P13671 934 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 BLKP51451 505 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 TLE3Q04726 772 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 UGP2Q16851 508 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 BRAT1Q6PJG6 821 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 CRTC1Q6UUV9 634 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 SLC35F3Q8IY50 421 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 NAT6Q93015 286 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 NAF1Q96HR8 494 aaKnown RBP19.94■□□□□ 0.78
COL9A3-210ENST00000472880 ZNF641Q96N77 438 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-210ENST00000472880 EIF3CQ99613 913 aaKnown RBP19.94■□□□□ 0.78
COL9A3-210ENST00000472880 PCDH12Q9NPG4 1184 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 PNMA8BQ9ULN7 279 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-210ENST00000472880 DOLKQ9UPQ8 538 aa19.94■□□□□ 0.78
COL9A3-210ENST00000472880 TMEM110-MUSTN1A8MSY1 372 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 DAPK3O43293 454 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 TSHRP16473 764 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 HTR1BP28222 390 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 PEX5P50542 639 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 ERVPABLB-1P60509 514 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 MAMLD1Q13495 774 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 C3orf38Q5JPI3 329 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 ESRP1Q6NXG1 681 aaKnown RBP19.93■□□□□ 0.78
COL9A3-210ENST00000472880 RBM44Q6ZP01 1051 aaKnown RBP19.93■□□□□ 0.78
COL9A3-210ENST00000472880 IRF2BP2Q7Z5L9 587 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 FSTL5Q8N475 847 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-210ENST00000472880 GRAMD1AQ96CP6 724 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 TUBGCP5Q96RT8 1024 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 SYT11Q9BT88 431 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 SNRNP25Q9BV90 132 aaKnown RBP19.93■□□□□ 0.78
COL9A3-210ENST00000472880 NAT10Q9H0A0 1025 aaKnown RBP19.93■□□□□ 0.78
COL9A3-210ENST00000472880 ATP13A3Q9H7F0 1226 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 THSD1Q9NS62 852 aa19.93■□□□□ 0.78
COL9A3-210ENST00000472880 LRRC53A6NM62 1247 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 TCEA3O75764 348 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 RNF8O76064 485 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 CTSEP14091 401 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 SERPINA4P29622 427 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 PAPOLAP51003 745 aaKnown RBP19.92■□□□□ 0.78
COL9A3-210ENST00000472880 CXADRP78310 365 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 TYRO3Q06418 890 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 ELOCQ15369 112 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 ASIC2Q16515 512 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 CA9Q16790 459 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 WSCD2Q2TBF2 565 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 PERM1Q5SV97 790 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 ERMARDQ5T6L9 678 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 BROXQ5VW32 411 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 PLEKHA7Q6IQ23 1121 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 GPR155Q7Z3F1 870 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 HID1Q8IV36 788 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 PAF1Q8N7H5 531 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 WDR48Q8TAF3 677 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 SCG3Q8WXD2 468 aaKnown RBP19.92■□□□□ 0.78
COL9A3-210ENST00000472880 HIC2Q96JB3 615 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 CINPQ9BW66 212 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-210ENST00000472880 SLC39A8Q9C0K1 460 aa19.92■□□□□ 0.78
COL9A3-210ENST00000472880 CLPBQ9H078 707 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms