RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 BIN1O00499 593 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 NVLO15381 856 aaKnown RBP9.45□□□□□ -0.9
VCL-204ENST00000472585 TSPAN6O43657 245 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 SMC2O95347 1197 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 ANXA6P08133 673 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 PON1P27169 355 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 OR1E1P30953 314 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 FLT3P36888 993 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 EIF4A3P38919 411 aaKnown RBP9.45□□□□□ -0.9
VCL-204ENST00000472585 ETV5P41161 510 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 CCR10P46092 362 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 SULT1E1P49888 294 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 GNA12Q03113 381 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 SLC20A2Q08357 652 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 KCNAB2Q13303 367 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 SGCGQ13326 291 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 BRMS1LQ5PSV4 323 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 ATXN7L2Q5T6C5 722 aaPredicted RBP9.45□□□□□ -0.9
VCL-204ENST00000472585 FAM72AQ5TYM5 149 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 FAM72DQ6L9T8 149 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 FOXR2Q6PJQ5 311 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 VPS36Q86VN1 386 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 FAM72BQ86X60 149 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 PCDH20Q8N6Y1 951 aaKnown RBP9.45□□□□□ -0.9
VCL-204ENST00000472585 KYQ8NBH2 561 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 TP53I13Q8NBR0 393 aaPredicted RBP9.45□□□□□ -0.9
VCL-204ENST00000472585 HTR3CQ8WXA8 447 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 TSACCQ96A04 125 aaPredicted RBP9.45□□□□□ -0.9
VCL-204ENST00000472585 CCDC74AQ96AQ1 378 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 PPP1R16AQ96I34 528 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 CCDC114Q96M63 670 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 TIGD1Q96MW7 591 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 KLHL32Q96NJ5 620 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 TMEM74Q96NL1 305 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 FUCA2Q9BTY2 467 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 CEP44Q9C0F1 390 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 ATP13A1Q9HD20 1204 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.45□□□□□ -0.9
VCL-204ENST00000472585 SPASTQ9UBP0 616 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 GULP1Q9UBP9 304 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 APOBEC3BQ9UH17 382 aaKnown RBP9.45□□□□□ -0.9
VCL-204ENST00000472585 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 NEU3Q9UQ49 428 aa9.45□□□□□ -0.9
VCL-204ENST00000472585 TIMP2P16035 220 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 ITIH1P19827 911 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 GABRB2P47870 512 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 DEUP1Q05D60 604 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 ALG11Q2TAA5 492 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 MYLK3Q32MK0 819 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 SLC25A52Q3SY17 297 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 ZNF805Q5CZA5 627 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 FAXCQ5TGI0 409 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 MANEALQ5VSG8 457 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 HIST2H2BCQ6DN03 193 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 NLRP14Q86W24 1093 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 ATCAYQ86WG3 371 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 FAM131BQ86XD5 332 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 ZFAND4Q86XD8 727 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 XYLT1Q86Y38 959 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 DRC7Q8IY82 874 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 DENND6BQ8NEG7 585 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 ISG20Q96AZ6 181 aaKnown RBP9.44□□□□□ -0.9
VCL-204ENST00000472585 KLC2Q9H0B6 622 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 FOXJ2Q9P0K8 574 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 SIRPGQ9P1W8 387 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 PLEKHB1Q9UF11 243 aaPredicted RBP9.44□□□□□ -0.9
VCL-204ENST00000472585 TUBD1Q9UJT1 453 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 DOLKQ9UPQ8 538 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 COQ6Q9Y2Z9 468 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 ADGRG1Q9Y653 693 aa9.44□□□□□ -0.9
VCL-204ENST00000472585 PRAMEF33A0A0G2JMD5 474 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 D6RAR5 112 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 KRIT1O00522 736 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 INSIG1O15503 277 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 PRAMEF10O60809 474 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 UGT2B4P06133 528 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 CDH5P33151 784 aaPredicted RBP9.43□□□□□ -0.9
VCL-204ENST00000472585 RECQLP46063 649 aaPredicted RBP9.43□□□□□ -0.9
VCL-204ENST00000472585 ARSDP51689 593 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 HK3P52790 923 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 MAPK10P53779 464 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 POLE2P56282 527 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 YPEL5P62699 121 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 ZFP36L1Q07352 338 aaKnown RBP9.43□□□□□ -0.9
VCL-204ENST00000472585 MTA1Q13330 715 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 KLHL40Q2TBA0 621 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 WSCD2Q2TBF2 565 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 TMEM164Q5U3C3 297 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 RETSATQ6NUM9 610 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 LRRC31Q6UY01 552 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 ZNF783Q6ZMS7 281 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 ENOSF1Q7L5Y1 443 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 TTC7BQ86TV6 843 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 DTX1Q86Y01 620 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 HID1Q8IV36 788 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 SDR16C5Q8N3Y7 309 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 PCDH19Q8TAB3 1148 aa9.43□□□□□ -0.9
VCL-204ENST00000472585 SCG3Q8WXD2 468 aaKnown RBP9.43□□□□□ -0.9
VCL-204ENST00000472585 ARHGEF2Q92974 986 aaKnown RBP9.43□□□□□ -0.9
VCL-204ENST00000472585 TBATAQ96M53 351 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms