RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CYTH1Q15438 398 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 ARL13BQ3SXY8 428 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 VWA3BQ502W6 1294 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 PHF19Q5T6S3 580 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 NLRP14Q86W24 1093 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 PTRH1Q86Y79 214 aaKnown RBP10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 OR1E3Q8WZA6 343 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 USP7Q93009 1102 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 PGAP3Q96FM1 320 aaPredicted RBP10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 HMCESQ96FZ2 354 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 PDXPQ96GD0 296 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 NCAPGQ9BPX3 1015 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 EDEM3Q9BZQ6 932 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 LRRN3Q9H3W5 708 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 NOL6Q9H6R4 1146 aaKnown RBP10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 GPATCH2LQ9NWQ4 482 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 TAB2Q9NYJ8 693 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 RRN3Q9NYV6 651 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 FOXJ2Q9P0K8 574 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 HPCAL4Q9UM19 191 aa10.21□□□□□ -0.77
SCAMP3-205ENST00000472397 MYO18BQ8IUG5 2567 aa10.21□□□□□ -0.78
SCAMP3-205ENST00000472397 HECTD1Q9ULT8 2610 aa10.21□□□□□ -0.78
SCAMP3-205ENST00000472397 TMEM202A6NGA9 273 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 NTN3O00634 580 aaPredicted RBP10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 KDELR3O43731 214 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 CREB3O43889 395 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 GSRP00390 522 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 JMJD7P0C870 316 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 RHOQP17081 205 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 CHRNB2P17787 502 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 MPSTP25325 297 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 GABRB2P47870 512 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 SRP54P61011 504 aaKnown RBP10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 MTA1Q13330 715 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 LRRC14Q15048 493 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 MAN2A1Q16706 1144 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 AMZ1Q400G9 498 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 MIIPQ5JXC2 388 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 KLHDC7AQ5VTJ3 777 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 FOXR2Q6PJQ5 311 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 ZNF783Q6ZMS7 281 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 MACC1Q6ZN28 852 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 TAF8Q7Z7C8 310 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 CLEC14AQ86T13 490 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 ZSWIM9Q86XI8 627 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 ZDHHC17Q8IUH5 632 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 CCNJLQ8IV13 435 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 PELI3Q8N2H9 469 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 ARL10Q8N8L6 244 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 FAM46DQ8NEK8 389 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 TPCN2Q8NHX9 752 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 FAM174AQ8TBP5 190 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 FAM172AQ8WUF8 416 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 PMEPA1Q969W9 287 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 RAB7BQ96AH8 199 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 TBC1D31Q96DN5 1066 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 CCDC97Q96F63 343 aaPredicted RBP10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 WBP1Q96G27 269 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 CELF6Q96J87 481 aaKnown RBP10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 FAM81BQ96LP2 452 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 APOOQ9BUR5 198 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 NDST4Q9H3R1 872 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 SEMA6CQ9H3T2 930 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 RDH14Q9HBH5 336 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 PCDH12Q9NPG4 1184 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 SAMSN1Q9NSI8 373 aaKnown RBP10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 TMEM248Q9NWD8 314 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 KIAA1468Q9P260 1216 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 LHX3Q9UBR4 397 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 KLQ9UEF7 1012 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 NEU3Q9UQ49 428 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 DAAM1Q9Y4D1 1078 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 RNF215Q9Y6U7 377 aa10.2□□□□□ -0.78
SCAMP3-205ENST00000472397 COL6A6A6NMZ7 2263 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 CAPN8A6NHC0 703 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 D6RAR5 112 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 J3KR12 359 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 TEX33O43247 280 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 BUB1BO60566 1050 aaPredicted RBP10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 TCEA3O75764 348 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 IGSF6O95976 241 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 ITGA2BP08514 1039 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 CCL4P13236 92 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 SDC4P31431 198 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 CDH5P33151 784 aaPredicted RBP10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 RGRP47804 291 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 LIG3P49916 1009 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 HK3P52790 923 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 MAZP56270 477 aaKnown RBP10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 HDAC4P56524 1084 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 OR1D5P58170 312 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 BPIFB4P59827 614 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 NFATC4Q14934 902 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 CLCA4Q14CN2 919 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 PTPRRQ15256 657 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 TBR1Q16650 682 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 MANEAQ5SRI9 462 aa10.19□□□□□ -0.78
SCAMP3-205ENST00000472397 MANEALQ5VSG8 457 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms