RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ATP8A1Q9Y2Q0 1164 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 SCN8AQ9UQD0 1980 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 A0A1B0GTW7 788 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 TRAFD1O14545 582 aaPredicted RBP19.93■□□□□ 0.78
HDAC7-220ENST00000471235 AREL1O15033 823 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 KHNYNO15037 678 aaKnown RBP19.93■□□□□ 0.78
HDAC7-220ENST00000471235 BCAT2O15382 392 aaPredicted RBP19.93■□□□□ 0.78
HDAC7-220ENST00000471235 SOCS5O75159 536 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 NEBLO76041 1014 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 PCDH8O95206 1070 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 JCHAINP01591 159 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 GNSP15586 552 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 ITKQ08881 620 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 TMEM259Q4ZIN3 620 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 CCDC181Q5TID7 509 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 SEL1L3Q68CR1 1132 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 NEK5Q6P3R8 708 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 SLC23A3Q6PIS1 610 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 ZC3H18Q86VM9 953 aaKnown RBP19.93■□□□□ 0.78
HDAC7-220ENST00000471235 HORMAD1Q86X24 394 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 REXO1L1PQ8IX06 675 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 CNTD1Q8N815 330 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 C12orf50Q8NA57 414 aaPredicted RBP19.93■□□□□ 0.78
HDAC7-220ENST00000471235 TRIM58Q8NG06 486 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 TFB1MQ8WVM0 346 aaKnown RBP19.93■□□□□ 0.78
HDAC7-220ENST00000471235 SLC6A18Q96N87 628 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 CAPN10Q9HC96 672 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 TM9SF3Q9HD45 589 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 FSCN3Q9NQT6 498 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 HAUS2Q9NVX0 235 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 SEPT10Q9P0V9 454 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 PCDHGC4Q9Y5F7 938 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 LAMA1P25391 3075 aa19.93■□□□□ 0.78
HDAC7-220ENST00000471235 LNP1A1A4G5 178 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 HTRA2O43464 458 aaPredicted RBP19.92■□□□□ 0.78
HDAC7-220ENST00000471235 TJP3O95049 919 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 SERPINF2P08697 491 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 ITIH2P19823 946 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 XPAP23025 273 aaPredicted RBP19.92■□□□□ 0.78
HDAC7-220ENST00000471235 OTUD4Q01804 1114 aaKnown RBP19.92■□□□□ 0.78
HDAC7-220ENST00000471235 NIPAL4Q0D2K0 466 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 CCDC173Q0VFZ6 552 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 IHHQ14623 411 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 ZNF284Q2VY69 593 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 KIAA1161Q6NSJ0 714 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 TTC7BQ86TV6 843 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 PRPF39Q86UA1 669 aaKnown RBP19.92■□□□□ 0.78
HDAC7-220ENST00000471235 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.92■□□□□ 0.78
HDAC7-220ENST00000471235 ARRDC2Q8TBH0 407 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 ACTL9Q8TC94 416 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 UBE2Q2Q8WVN8 375 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 KLK6Q92876 244 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 PCDH12Q9NPG4 1184 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 RXFP3Q9NSD7 469 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 SLC6A14Q9UN76 642 aa19.92■□□□□ 0.78
HDAC7-220ENST00000471235 HACD1B0YJ81 288 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 TSPAN6O43657 245 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 FOXD2O60548 495 aaPredicted RBP19.91■□□□□ 0.78
HDAC7-220ENST00000471235 CPP00450 1065 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 PRKCGP05129 697 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 PTPN3P26045 913 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 SUOXP51687 545 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 IRX4P78413 519 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 KLF1Q13351 362 aaPredicted RBP19.91■□□□□ 0.78
HDAC7-220ENST00000471235 XRCC4Q13426 336 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 RPS6KA1Q15418 735 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 UGP2Q16851 508 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 AASDHQ4L235 1098 aaPredicted RBP19.91■□□□□ 0.78
HDAC7-220ENST00000471235 SETMARQ53H47 684 aaPredicted RBP19.91■□□□□ 0.78
HDAC7-220ENST00000471235 SLC45A4Q5BKX6 768 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 LAYNQ6UX15 382 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 PAF1Q8N7H5 531 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 FAM118BQ9BPY3 351 aa19.91■□□□□ 0.78
HDAC7-220ENST00000471235 NUSAP1Q9BXS6 441 aaKnown RBP19.91■□□□□ 0.78
HDAC7-220ENST00000471235 LRP4O75096 1905 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 PRR5-ARHGAP8B1AHC4 643 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 H7C0C1 242 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 NEMP1O14524 444 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 WNT9AO14904 365 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 ZSCAN12O43309 604 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 MMP2P08253 660 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 PRLRP16471 622 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 NUDT1P36639 197 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 MMP12P39900 470 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 ATP5OP48047 213 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 RPS21P63220 83 aaKnown RBP19.9■□□□□ 0.78
HDAC7-220ENST00000471235 LMNB2Q03252 620 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 ELP6Q0PNE2 266 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 WASHC5Q12768 1159 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 FGL2Q14314 439 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 SEL1L2Q5TEA6 688 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 NAPEPLDQ6IQ20 393 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 PDCD6IPQ8WUM4 868 aaKnown RBP19.9■□□□□ 0.78
HDAC7-220ENST00000471235 SPOCK2Q92563 424 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 FEM1CQ96JP0 617 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 SERAC1Q96JX3 654 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 AGAP3Q96P47 875 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 EDEM2Q9BV94 578 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 DMTF1Q9Y222 760 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 RAI2Q9Y5P3 530 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms