RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GDPD4Q6W3E5 623 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 LEKR1Q6ZMV7 388 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 SLC26A9Q7LBE3 791 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 PLPP6Q8IY26 295 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 GPR156Q8NFN8 814 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 SMARCE1Q969G3 411 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 SEMA6CQ9H3T2 930 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 LRIT1Q9P2V4 623 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 ANAPC2Q9UJX6 822 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 APPL1Q9UKG1 709 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 HPCAL4Q9UM19 191 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 COQ6Q9Y2Z9 468 aa19.18■□□□□ 0.66
NCKIPSD-209ENST00000470006 IGLV3-10A0A075B6K4 115 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 GSRP00390 522 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 KRT9P35527 623 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 ACVRL1P37023 503 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 GEMIN4P57678 1058 aaKnown RBP19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 RAD51Q06609 339 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 NFATC4Q14934 902 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 AMZ1Q400G9 498 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 ATXN7L2Q5T6C5 722 aaPredicted RBP19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 ENOSF1Q7L5Y1 443 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 SPRED1Q7Z699 444 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 OR2AP1Q8NGE2 309 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 DHTKD1Q96HY7 919 aaPredicted RBP19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 TBCBQ99426 244 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 APOOQ9BUR5 198 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 OR1A2Q9Y585 309 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 SDK2Q58EX2 2172 aa19.17■□□□□ 0.66
NCKIPSD-209ENST00000470006 B4DGG1 531 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 CD160O95971 181 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 CCL4P13236 92 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 ETFBP38117 255 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 INPP5AQ14642 412 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 C16orf72Q14CZ0 275 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 CERCAMQ5T4B2 595 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 GJB7Q6PEY0 223 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 NYAP1Q6ZVC0 841 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 PIM3Q86V86 326 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 ZNF354CQ86Y25 554 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 SNX21Q969T3 373 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 SCAND2PQ9GZW5 306 aaPredicted RBP19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 DPEP2Q9H4A9 486 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 RDH14Q9HBH5 336 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 TUBD1Q9UJT1 453 aa19.16■□□□□ 0.66
NCKIPSD-209ENST00000470006 SPTBN1Q01082 2364 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 NBPF19A0A087WUL8 3843 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 LRRK1Q38SD2 2015 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 PCCBP05166 539 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 PNLIPP16233 465 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 C14orf28Q4W4Y0 310 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 RWDD4Q6NW29 188 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 TMPRSS9Q7Z410 1059 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 SLITRK4Q8IW52 837 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 ZNF397Q8NF99 534 aaPredicted RBP19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 C9orf43Q8TAL5 461 aaPredicted RBP19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 ARHGEF2Q92974 986 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 NKD1Q969G9 470 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 WDR92Q96MX6 357 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 PSMG3-AS1Q96PY0 264 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 HAPLN3Q96S86 360 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 RBM15Q96T37 977 aaKnown RBP eCLIP19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 CRACR2AQ9BSW2 395 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 PCDHGC3Q9UN70 934 aa19.15■□□□□ 0.66
NCKIPSD-209ENST00000470006 LRP4O75096 1905 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 BECN2A8MW95 431 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 LIFP15018 202 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 ALDH4A1P30038 563 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 PTK2Q05397 1052 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 WSCD2Q2TBF2 565 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 SLC25A52Q3SY17 297 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 PTPN20Q4JDL3 420 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 ZDHHC17Q8IUH5 632 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 SFTPA2Q8IWL1 248 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 RCBTB1Q8NDN9 531 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 GPBAR1Q8TDU6 330 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 PGAP3Q96FM1 320 aaPredicted RBP19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 FAM81BQ96LP2 452 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 GDAP1L1Q96MZ0 367 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 CATSPER2Q96P56 530 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 TAAR9Q96RI9 348 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 B3GNT4Q9C0J1 378 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 PDCL3Q9H2J4 239 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 PLCB1Q9NQ66 1216 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 ZNF212Q9UDV6 495 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 DNAI1Q9UI46 699 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 MOSPD1Q9UJG1 213 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 PLAAQ9Y263 795 aa19.14■□□□□ 0.65
NCKIPSD-209ENST00000470006 FAM170AA1A519 330 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 CLEC18AA5D8T8 446 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 CPNE6O95741 557 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 TIMP2P16035 220 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 BIRC2Q13490 618 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 FAM102AQ5T9C2 384 aaPredicted RBP19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 CLEC18BQ6UXF7 455 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 FAM131BQ86XD5 332 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 IRF2BP1Q8IU81 584 aa19.13■□□□□ 0.65
NCKIPSD-209ENST00000470006 CREBRFQ8IUR6 639 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms