RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MROH6A6NGR9 719 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 LDB2O43679 373 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 PENKP01210 267 aaPredicted RBP18.27■□□□□ 0.52
SMC4-211ENST00000469858 PDHA1P08559 390 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 DRD4P21917 467 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 CSE1LP55060 971 aaKnown RBP18.27■□□□□ 0.52
SMC4-211ENST00000469858 NSUN2Q08J23 767 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMC4-211ENST00000469858 QPCTQ16769 361 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 PITRM1Q5JRX3 1037 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 LY6G5CQ5SRR4 150 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 FSTL4Q6MZW2 842 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 NCEH1Q6PIU2 408 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 CDHR3Q6ZTQ4 885 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 DENND6AQ8IWF6 608 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 LPCAT1Q8NF37 534 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 OR13J1Q8NGT2 312 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 PDCD6IPQ8WUM4 868 aaKnown RBP18.27■□□□□ 0.52
SMC4-211ENST00000469858 PTPRN2Q92932 1015 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 FAM111AQ96PZ2 611 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 APOL5Q9BWW9 433 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 GGT7Q9UJ14 662 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 ARIH1Q9Y4X5 557 aaPredicted RBP18.27■□□□□ 0.52
SMC4-211ENST00000469858 KCTD3Q9Y597 815 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 ARL5AQ9Y689 179 aa18.27■□□□□ 0.52
SMC4-211ENST00000469858 BPTFQ12830 3046 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 PAPSS2O95340 614 aaPredicted RBP18.26■□□□□ 0.51
SMC4-211ENST00000469858 PRLP01236 227 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 ALADP13716 330 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 TYRP14679 529 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 TCF3P15923 654 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 CCT5P48643 541 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 TRAF2Q12933 501 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 CTBP1Q13363 440 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 KCNC3Q14003 757 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 RARS2Q5T160 578 aaKnown RBP18.26■□□□□ 0.51
SMC4-211ENST00000469858 ZNF470Q6ECI4 717 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 FOXR1Q6PIV2 292 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 CNTN4Q8IWV2 1026 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 DCLK2Q8N568 766 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 VPS39Q96JC1 886 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 LMLNQ96KR4 655 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 CCL22O00626 93 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 TIMM44O43615 452 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 BUD23O43709 281 aaKnown RBP18.26■□□□□ 0.51
SMC4-211ENST00000469858 FOXN2P32314 431 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 SLC1A2P43004 574 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 CTSOP43234 321 aaPredicted RBP18.26■□□□□ 0.51
SMC4-211ENST00000469858 PLK1P53350 603 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 MPP1Q00013 466 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 SLC12A1Q13621 1099 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 FUT11Q495W5 492 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 ASTLQ6HA08 431 aaPredicted RBP18.26■□□□□ 0.51
SMC4-211ENST00000469858 NLRP9Q7RTR0 991 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 CELF5Q8N6W0 485 aaKnown RBP18.26■□□□□ 0.51
SMC4-211ENST00000469858 OR6K2Q8NGY2 324 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 BRSK1Q8TDC3 778 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 RPL10LQ96L21 214 aaKnown RBP18.26■□□□□ 0.51
SMC4-211ENST00000469858 FAM167BQ9BTA0 163 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 MKS1Q9NXB0 559 aa18.26■□□□□ 0.51
SMC4-211ENST00000469858 MTO1Q9Y2Z2 717 aaKnown RBP18.26■□□□□ 0.51
SMC4-211ENST00000469858 TOP3BO95985 862 aaKnown RBP18.25■□□□□ 0.51
SMC4-211ENST00000469858 TYK2P29597 1187 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 PRAMEP78395 509 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 TMPRSS15P98073 1019 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 ZKSCAN8Q15776 578 aaPredicted RBP18.25■□□□□ 0.51
SMC4-211ENST00000469858 NEPROQ6NW34 567 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 CMC1Q7Z7K0 106 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 SRLQ86TD4 932 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 ADGRG2Q8IZP9 1017 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 CNPY4Q8N129 248 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 ACMSDQ8TDX5 336 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 OTUB2Q96DC9 234 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 LRRC3BQ96PB8 259 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 MCMBPQ9BTE3 642 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 SNX15Q9NRS6 342 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 GGA2Q9UJY4 613 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 SPO11Q9Y5K1 396 aa18.25■□□□□ 0.51
SMC4-211ENST00000469858 PRRC2BQ5JSZ5 2229 aaKnown RBP18.25■□□□□ 0.51
SMC4-211ENST00000469858 WDR91A4D1P6 747 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 ETV4P43268 484 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 STK19P49842 368 aaPredicted RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 SERPINB8P50452 374 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 ARSDP51689 593 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 LAMB3Q13751 1172 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 PDE1CQ14123 709 aaPredicted RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 PTPRCAPQ14761 206 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 PDK4Q16654 411 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 UGP2Q16851 508 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 ZC3HC1Q86WB0 502 aaKnown RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 NPAS3Q8IXF0 933 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 OTUD6BQ8N6M0 293 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 OR6P1Q8NGX9 317 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 HDAC10Q969S8 669 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 DNAJC1Q96KC8 554 aaKnown RBP18.24■□□□□ 0.51
SMC4-211ENST00000469858 SMIM14Q96QK8 99 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 ADGRE3Q9BY15 652 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 TNKS2Q9H2K2 1166 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 RHOJQ9H4E5 214 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 CAB39LQ9H9S4 337 aa18.24■□□□□ 0.51
SMC4-211ENST00000469858 FGFR1OP2Q9NVK5 253 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms