RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ACSL1P33121 698 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 TAS2R38P59533 333 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 MRPS25P82663 173 aaKnown RBP14.91□□□□□ -0.02
COL9A3-209ENST00000469852 SEMG2Q02383 582 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 GRM3Q14832 879 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 PCSK7Q16549 785 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 TTC31Q49AM3 519 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-209ENST00000469852 SYCP2LQ5T4T6 812 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 ITPRIPL1Q6GPH6 555 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-209ENST00000469852 ERN2Q76MJ5 926 aaKnown RBP14.91□□□□□ -0.02
COL9A3-209ENST00000469852 LONP2Q86WA8 852 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 CCDC89Q8N998 374 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 GANCQ8TET4 914 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 ATOH1Q92858 354 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-209ENST00000469852 MRGPRX2Q96LB1 330 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 ZNF641Q96N77 438 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-209ENST00000469852 TRIB3Q96RU7 358 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 OMDQ99983 421 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 MBD1Q9UIS9 605 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-209ENST00000469852 ITM2BQ9Y287 266 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 PCDHB9Q9Y5E1 797 aa14.91□□□□□ -0.02
COL9A3-209ENST00000469852 ZFHX2Q9C0A1 2572 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-209ENST00000469852 CCDC163A0A0D9SF12 145 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 A0A0U1RQS6 177 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 CCDC188H7C350 402 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 GFRA3O60609 400 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 ZNF189O75820 626 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-209ENST00000469852 PGLSO95336 258 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 KRT14P02533 472 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 ADRB3P13945 408 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 VPS41P49754 854 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 NEK3P51956 506 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 WHAMMP3Q1A5X7 153 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 PARP6Q2NL67 630 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 ZNF528Q3MIS6 628 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 USP30Q70CQ3 517 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 KLHDC8BQ8IXV7 354 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 PIH1D2Q8WWB5 315 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 PPP1R16AQ96I34 528 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 KRT12Q99456 494 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 HDAC8Q9BY41 377 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 IRF2BPLQ9H1B7 796 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 ETNK1Q9HBU6 452 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 DYRK4Q9NR20 520 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 HAUS2Q9NVX0 235 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 WSB2Q9NYS7 404 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-209ENST00000469852 DKK3Q9UBP4 350 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 PCYOX1Q9UHG3 505 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 FAM153AQ9UHL3 310 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 SCML1Q9UN30 329 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 FANCMQ8IYD8 2048 aa14.9□□□□□ -0.02
COL9A3-209ENST00000469852 CFAP54Q96N23 3096 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 LRRK1Q38SD2 2015 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 PROB1E7EW31 1015 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 HRO43593 1189 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 CPP00450 1065 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 CHRNA4P43681 627 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 TERF1P54274 439 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 ADPRHP54922 357 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 WNT3AP56704 352 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 GALNT3Q14435 633 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 SPARCL1Q14515 664 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 SLC14A2Q15849 920 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 UGP2Q16851 508 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 ARMC12Q5T9G4 340 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 KCTD11Q693B1 232 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 LPCAT1Q8NF37 534 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 IPMKQ8NFU5 416 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 SLCO2A1Q92959 643 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 TOE1Q96GM8 510 aaKnown RBP14.89□□□□□ -0.03
COL9A3-209ENST00000469852 APOL2Q9BQE5 337 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 TRIM51Q9BSJ1 452 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 PCDH9Q9HC56 1237 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 RAB6BQ9NRW1 208 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 PAK5Q9P286 719 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 FZD4Q9ULV1 537 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 MYLKQ15746 1914 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 DOCK9Q9BZ29 2069 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 ABCA7Q8IZY2 2146 aa14.89□□□□□ -0.03
COL9A3-209ENST00000469852 CEP192Q8TEP8 1941 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 UPK3BL1B0FP48 263 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 UPK3BL2E5RIL1 263 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 TTI1O43156 1089 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 PLRG1O43660 514 aaKnown RBP14.88□□□□□ -0.03
COL9A3-209ENST00000469852 USP12O75317 370 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 ZNF217O75362 1048 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 ECEL1O95672 775 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 AGTP01019 485 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 ALPIP09923 528 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 ATXN1LP0C7T5 689 aaKnown RBP14.88□□□□□ -0.03
COL9A3-209ENST00000469852 CTPS1P17812 591 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 CD6P30203 668 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 ADRA1AP35348 466 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 GEMP55040 296 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 LMNB2Q03252 620 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 CDK18Q07002 472 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 CKAP4Q07065 602 aaKnown RBP14.88□□□□□ -0.03
COL9A3-209ENST00000469852 MPP3Q13368 585 aa14.88□□□□□ -0.03
COL9A3-209ENST00000469852 USP39Q53GS9 565 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms