RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TOMM70O94826 608 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 SLC35E2BP0CK96 405 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 CNTFP26441 200 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 SOX11P35716 441 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 CD151P48509 253 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 MARC1Q5VT66 337 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 TIFABQ6ZNK6 161 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 COLGALT2Q8IYK4 626 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 PAF1Q8N7H5 531 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 ZNF398Q8TD17 642 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 HDAC10Q969S8 669 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 PBXIP1Q96AQ6 731 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 HIC2Q96JB3 615 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 ZNF512Q96ME7 567 aaPredicted RBP9.51□□□□□ -0.89
TOP3A-203ENST00000469739 SEMA3CQ99985 751 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 SLC7A8Q9UHI5 535 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 TAGLN3Q9UI15 199 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 LRFN2Q9ULH4 789 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 AAR2Q9Y312 384 aaKnown RBP9.51□□□□□ -0.89
TOP3A-203ENST00000469739 PCDHB5Q9Y5E4 795 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 SZT2Q5T011 3432 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 CCDC85CA6NKD9 419 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 KLF11O14901 512 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 TLR5O60602 858 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 TRIM13O60858 407 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 TMCC1O94876 653 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 BMP1P13497 986 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 KCNA5P22460 613 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 NPY2RP49146 381 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 NME5P56597 212 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 COG7P83436 770 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
TOP3A-203ENST00000469739 TCTN1Q2MV58 587 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 PCID2Q5JVF3 399 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 CCSAPQ6IQ19 270 aaPredicted RBP9.51□□□□□ -0.89
TOP3A-203ENST00000469739 NEPROQ6NW34 567 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 RIPOR1Q6ZS17 1223 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 HPS6Q86YV9 775 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 SCUBE1Q8IWY4 988 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 DEFB107AQ8IZN7 70 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 RTL3Q8N8U3 475 aaKnown RBP9.51□□□□□ -0.89
TOP3A-203ENST00000469739 OR52K2Q8NGK3 314 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 AUTS2Q8WXX7 1259 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 USP13Q92995 863 aaPredicted RBP9.51□□□□□ -0.89
TOP3A-203ENST00000469739 SMOC2Q9H3U7 446 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 ARHGEF38Q9NXL2 777 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 MARCH4Q9P2E8 410 aaPredicted RBP9.51□□□□□ -0.89
TOP3A-203ENST00000469739 ZDHHC2Q9UIJ5 367 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 FBXO5Q9UKT4 447 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 DSEQ9UL01 958 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 ACOT9Q9Y305 439 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 ARL5AQ9Y689 179 aa9.51□□□□□ -0.89
TOP3A-203ENST00000469739 CASP8AP2Q9UKL3 1982 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 A0A1W2PQ45 241 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 CAPN14A8MX76 684 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 C9JVG2 144 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 MUSKO15146 869 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 BIRC5O15392 142 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 MTSS1O43312 755 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 HNRNPRO43390 633 aaKnown RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 NBNO60934 754 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 ANXA9O76027 345 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 GJB5O95377 273 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 CYP11A1P05108 521 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 INHAP05111 366 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 STMN1P16949 149 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 CCNCP24863 283 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 HCAR3P49019 387 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 SLC11A1P49279 550 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 CDH13P55290 713 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 LSAMPQ13449 338 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 TRIM71Q2Q1W2 868 aaKnown RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 ANO4Q32M45 955 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 SPOUT1Q5T280 376 aaKnown RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 EGFLAMQ63HQ2 1017 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 LINGO4Q6UY18 593 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 FRMD7Q6ZUT3 714 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 TMC7Q7Z402 723 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 MON1AQ86VX9 555 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 ULK2Q8IYT8 1036 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 CENPLQ8N0S6 344 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 LGI2Q8N0V4 545 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 SLC26A7Q8TE54 656 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 NRG4Q8WWG1 115 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 SLC45A3Q96JT2 553 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 TBATAQ96M53 351 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 SERPINB11Q96P15 392 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 DDX50Q9BQ39 737 aaKnown RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 CCDC106Q9BWC9 280 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 OSBPL2Q9H1P3 480 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 FBXO9Q9UK97 447 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-203ENST00000469739 ADAM28Q9UKQ2 775 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 PCDHB8Q9UN66 801 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 PCDHB7Q9Y5E2 793 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 COMMD3-BMI1R4GMX3 469 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 GPR39O43194 453 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 TIMM44O43615 452 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 ALDH2P05091 517 aa9.5□□□□□ -0.89
TOP3A-203ENST00000469739 SBK3P0C264 359 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms