RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 APOFQ13790 326 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 MFSD5Q6N075 450 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 IRF2BP2Q7Z5L9 587 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ARRDC4Q8NCT1 418 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 LRRC20Q8TCA0 184 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 SLC2A14Q8TDB8 520 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 TRUB1Q8WWH5 349 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 ROPN1BQ9BZX4 212 aaPredicted RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 TRIM15Q9C019 465 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 TTYH3Q9C0H2 523 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.03□□□□□ -0.8
NUP50-214ENST00000469163 HIPK3Q9H422 1215 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ROPN1Q9HAT0 212 aaPredicted RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 GPAMQ9HCL2 828 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 FAM105AQ9NUU6 356 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 IL20Q9NYY1 176 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 C2orf71A6NGG8 1288 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 SLC9A3R1O14745 358 aaPredicted RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 NCAM2O15394 837 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 PJA2O43164 708 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 CCNT2O60583 730 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 MAGEC1O60732 1142 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ATG7O95352 703 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 F2P00734 622 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 MCF2P10911 925 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 CCL5P13501 91 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ZNF182P17025 639 aaPredicted RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 PSMC3P17980 439 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 CA4P22748 312 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 EEF1DP29692 281 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 OR3A3P47888 321 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 EFHC1Q5JVL4 640 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 DENND1BQ6P3S1 775 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 FAM109AQ8N4B1 249 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 OR8K3Q8NH51 312 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 FANK1Q8TC84 345 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 PIK3R3Q92569 461 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 INTS12Q96CB8 462 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 ALPK1Q96QP1 1244 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 WACQ9BTA9 647 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 RPRD1BQ9NQG5 326 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 POLE4Q9NR33 117 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ASIC3Q9UHC3 531 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 CYB5R1Q9UHQ9 305 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ANAPC5Q9UJX4 755 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 GMEB2Q9UKD1 530 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 GNEQ9Y223 722 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 CROCCQ5TZA2 2017 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 FOCADQ5VW36 1801 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 IQANK1A0A1B0GTG1 560 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 TRIM77I1YAP6 450 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 TM7SF2O76062 418 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 OR7A10O76100 309 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 SLC4A1P02730 911 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 CD48P09326 243 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 GZMAP12544 262 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 GRIK1P39086 918 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ETV1P50549 477 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 SNX16P57768 344 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 FAM214AQ32MH5 1076 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ZACNQ401N2 412 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 MAMDC4Q6UXC1 1216 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 TMPRSS9Q7Z410 1059 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 LRRTM3Q86VH5 581 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 MIB1Q86YT6 1006 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ABRAQ8N0Z2 381 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 GRIN3AQ8TCU5 1115 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 TFAP2BQ92481 460 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 HTRA1Q92743 480 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 CEP41Q9BYV8 373 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 STN1Q9H668 368 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 ZDHHC18Q9NUE0 388 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 ADPRHL2Q9NX46 363 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 TEKT2Q9UIF3 430 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 SMG5Q9UPR3 1016 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 SBF1O95248 1867 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 CAPN14A8MX76 684 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 AURKAO14965 403 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 PIGNO95427 931 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 TBXAS1P24557 533 aaPredicted RBP10.02□□□□□ -0.8
NUP50-214ENST00000469163 SLC12A2P55011 1212 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 EIF3EP60228 445 aaKnown RBP10.02□□□□□ -0.8
NUP50-214ENST00000469163 GPC5P78333 572 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 NAB2Q15742 525 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 MGAT5BQ3V5L5 792 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 TRIM60Q495X7 471 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 TNFAIP8L3Q5GJ75 292 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 FBXO47Q5MNV8 452 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 C1orf220Q5T0J3 134 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 SIX6OS1Q8N1H7 587 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 ST8SIA2Q92186 375 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 SH3KBP1Q96B97 665 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 C17orf62Q9BQA9 187 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 MROQ9BYG7 248 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 SEPT3Q9UH03 358 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 MAN2B2Q9Y2E5 1009 aa10.02□□□□□ -0.8
NUP50-214ENST00000469163 PHIPQ8WWQ0 1821 aa10.02□□□□□ -0.81
NUP50-214ENST00000469163 A0A1W2PQ45 241 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms