RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 C11orf65Q8NCR3 313 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 FAM216AQ8WUB2 273 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 ST8SIA4Q92187 359 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 TRIB2Q92519 343 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 SNAPC3Q92966 411 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 RNF125Q96EQ8 232 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 ZC3HAV1LQ96H79 300 aaKnown RBP5.55□□□□□ -1.52
XRN1-207ENST00000468894 TXNDC15Q96J42 360 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 AGXT2Q9BYV1 514 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 C9orf78Q9NZ63 289 aaPredicted RBP5.55□□□□□ -1.52
XRN1-207ENST00000468894 OR6C3Q9NZP0 311 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 SELENONQ9NZV5 590 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 PGAP2Q9UHJ9 254 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 CARD8Q9Y2G2 431 aa5.55□□□□□ -1.52
XRN1-207ENST00000468894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.55□□□□□ -1.52
XRN1-207ENST00000468894 A0A1B0GVC2 190 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 A0A1B0GVM2 712 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 C4orf47A7E2U8 309 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 KRTAP29-1A8MX34 341 aaPredicted RBP5.54□□□□□ -1.52
XRN1-207ENST00000468894 CREB3O43889 395 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 AGR2O95994 175 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 PRSS2P07478 247 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 PCNAP12004 261 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 ZNF12P17014 697 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 XBP1P17861 261 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 ABCD3P28288 659 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 CCKBRP32239 447 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 GRIK3Q13003 919 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 PLCB4Q15147 1175 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 RUSC1-AS1Q66K80 236 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 NOXA1Q86UR1 476 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 ERGIC1Q969X5 290 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 TBATAQ96M53 351 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 EIF2AK1Q9BQI3 630 aaKnown RBP5.54□□□□□ -1.52
XRN1-207ENST00000468894 MXRA8Q9BRK3 442 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 SLC25A33Q9BSK2 321 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 CD93Q9NPY3 652 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 CYP46A1Q9Y6A2 500 aa5.54□□□□□ -1.52
XRN1-207ENST00000468894 TEX13CA0A0J9YWL9 993 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 IKBKBO14920 756 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 KCNJ13O60928 360 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 F9P00740 461 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 COX7A2P14406 83 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 PIGAP37287 484 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 HDAC4P56524 1084 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 DSCR9P59020 149 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 KEAP1Q14145 624 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 VEPH1Q14D04 833 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 ARHGEF6Q15052 776 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 SLC9B1Q4ZJI4 515 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 TXNDC8Q6A555 127 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 ZNF324BQ6AW86 544 aaPredicted RBP5.53□□□□□ -1.52
XRN1-207ENST00000468894 TYW3Q6IPR3 259 aaKnown RBP5.53□□□□□ -1.52
XRN1-207ENST00000468894 CRELD2Q6UXH1 353 aaPredicted RBP5.53□□□□□ -1.52
XRN1-207ENST00000468894 DHX40Q8IX18 779 aaKnown RBP5.53□□□□□ -1.52
XRN1-207ENST00000468894 NOC3LQ8WTT2 800 aaKnown RBP5.53□□□□□ -1.52
XRN1-207ENST00000468894 TMED6Q8WW62 240 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 GLIS2Q9BZE0 524 aaPredicted RBP5.53□□□□□ -1.52
XRN1-207ENST00000468894 SLC25A18Q9H1K4 315 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 DDX4Q9NQI0 724 aaKnown RBP5.53□□□□□ -1.52
XRN1-207ENST00000468894 PPP1R14DQ9NXH3 145 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 SARDHQ9UL12 918 aa5.53□□□□□ -1.52
XRN1-207ENST00000468894 TRIP12Q14669 1992 aaPredicted RBP5.53□□□□□ -1.52
XRN1-207ENST00000468894 IGLV5-52A0A0A0MRZ9 124 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 A6NLC8 198 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 NPIPB11E5RHQ5 1161 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 TSPAN4O14817 238 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 NPHP1O15259 732 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 SERPINI2O75830 405 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 VNN2O95498 520 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 FCGR1AP12314 374 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 RPL3P39023 403 aaKnown RBP5.52□□□□□ -1.53
XRN1-207ENST00000468894 PTP4A2Q12974 167 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 RNPS1Q15287 305 aaKnown RBP5.52□□□□□ -1.53
XRN1-207ENST00000468894 EFHC1Q5JVL4 640 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 H1FNTQ75WM6 255 aaPredicted RBP5.52□□□□□ -1.53
XRN1-207ENST00000468894 RRM2BQ7LG56 351 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 ADHFE1Q8IWW8 467 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 IL17REQ8NFR9 667 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 NUDCD2Q8WVJ2 157 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 OTULINQ96BN8 352 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 KIF1BPQ96EK5 621 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 RRP36Q96EU6 259 aaKnown RBP5.52□□□□□ -1.53
XRN1-207ENST00000468894 KLHL15Q96M94 604 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 SIN3AQ96ST3 1273 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 MEIS3Q99687 375 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 PAIP1Q9H074 479 aaKnown RBP5.52□□□□□ -1.53
XRN1-207ENST00000468894 UBN1Q9NPG3 1134 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 ARHGAP26Q9UNA1 814 aa5.52□□□□□ -1.53
XRN1-207ENST00000468894 A0A1W2PQM1 296 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 CCDC189A1A4V9 331 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 SRRM3A6NNA2 597 aaPredicted RBP5.51□□□□□ -1.53
XRN1-207ENST00000468894 WNT9BO14905 357 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 TNFSF14O43557 240 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 PAPSS2O95340 614 aaPredicted RBP5.51□□□□□ -1.53
XRN1-207ENST00000468894 CH25HO95992 272 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 KIF5AQ12840 1032 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 TRAF2Q12933 501 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 HLFQ16534 295 aa5.51□□□□□ -1.53
XRN1-207ENST00000468894 FAM69AQ5T7M9 428 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms