RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 IL10RBQ08334 325 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 CYP4F3Q08477 520 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 NSUN2Q08J23 767 aaKnown RBP eCLIP7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 DPYSQ14117 519 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 RFTN1Q14699 578 aaPredicted RBP7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 LRRC14Q15048 493 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 DPYSL2Q16555 572 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 SMTNL2Q2TAL5 461 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 PROX2Q3B8N5 592 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 TMEM52BQ4KMG9 183 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 CCDC122Q5T0U0 273 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 HES3Q5TGS1 186 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 AFMIDQ63HM1 303 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 TMCO3Q6UWJ1 677 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 ARHGAP36Q6ZRI8 547 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 CYP4V2Q6ZWL3 525 aaPredicted RBP7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 POLNQ7Z5Q5 900 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 SRLQ86TD4 932 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 ARHGAP12Q8IWW6 846 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 NPWQ8N729 165 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 BTN2A2Q8WVV5 523 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 NUP85Q9BW27 656 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 ATP13A3Q9H7F0 1226 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 PCDH12Q9NPG4 1184 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 GPR27Q9NS67 375 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 EVA1BQ9NVM1 165 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 NLGN3Q9NZ94 848 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 ANAPC7Q9UJX3 599 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 PTPRBP23467 1997 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 TP53BP1Q12888 1972 aaPredicted RBP7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 PLXNB3Q9ULL4 1909 aa7.25□□□□□ -1.25
SNRPD3-205ENST00000468770 COL5A1P20908 1838 aaPredicted RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TSPAN11A1L157 253 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TMEM110-MUSTN1A8MSY1 372 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 K7ESM1 405 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TOR1BO14657 336 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 RIOK3O14730 519 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 AQP9O43315 295 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CBFA2T2O43439 604 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 LZTS3O60299 673 aaPredicted RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 NEBLO76041 1014 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 GYPCP04921 128 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CYP1A2P05177 515 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 GIMD1P0DJR0 217 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 RARAP10276 462 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CKMT1AP12532 417 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 C6P13671 934 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 NME1P15531 152 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TCF4P15884 667 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 HTR1BP28222 390 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 EIF4A3P38919 411 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 RGRP47804 291 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 LIG3P49916 1009 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CLDN6P56747 220 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 SLC10A7Q0GE19 358 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 EIF2B5Q13144 721 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TARDBPQ13148 414 aaKnown RBP eCLIP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CAMK2BQ13554 666 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 KRT81Q14533 505 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 ZNF235Q14590 738 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 LBRQ14739 615 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 HADHQ16836 314 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TSR1Q2NL82 804 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 FAXCQ5TGI0 409 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TMCO4Q5TGY1 634 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 KDM7AQ6ZMT4 941 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TP53INP2Q8IXH6 220 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 BBS5Q8N3I7 341 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 NIPA2Q8N8Q9 360 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 FAM181AQ8N9Y4 354 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 ZNF548Q8NEK5 533 aaPredicted RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 LMX1AQ8TE12 382 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 NSMCE1Q8WV22 266 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 TEKT4Q8WW24 435 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 APOLD1Q96LR9 279 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 ZNF599Q96NL3 588 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CSPG4P5Q96PW8 444 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 PSKH2Q96QS6 385 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 IL12RB2Q99665 862 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 SLC13A1Q9BZW2 595 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 XPO4Q9C0E2 1151 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 ABCG4Q9H172 646 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CAAP1Q9H8G2 361 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 MBNL1Q9NR56 388 aaKnown RBP7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CTTNBP2NLQ9P2B4 639 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 SPASTQ9UBP0 616 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 DKK4Q9UBT3 224 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 SEPT3Q9UH03 358 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 KLF15Q9UIH9 416 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CLCA2Q9UQC9 943 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 ATP8A1Q9Y2Q0 1164 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 COQ6Q9Y2Z9 468 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 AK5Q9Y6K8 562 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 CSNK1G3Q9Y6M4 447 aa7.24□□□□□ -1.25
SNRPD3-205ENST00000468770 ACACAQ13085 2346 aa7.23□□□□□ -1.25
SNRPD3-205ENST00000468770 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.23□□□□□ -1.25
SNRPD3-205ENST00000468770 CPED1A4D0V7 1026 aa7.23□□□□□ -1.25
SNRPD3-205ENST00000468770 CFAP69A5D8W1 941 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms