RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 CORO1CQ9ULV4 474 aaPredicted RBP6.07□□□□□ -1.44
SHQ1-205ENST00000468371 NFS1Q9Y697 457 aa6.07□□□□□ -1.44
SHQ1-205ENST00000468371 MYH11P35749 1972 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ANHXE9PGG2 379 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RAMP2O60895 175 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 CLDN11O75508 207 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ASMTLO95671 621 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 LSM8O95777 96 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 DLDP09622 509 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 CTSEP14091 401 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 PECAM1P16284 738 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 HMGA1P17096 107 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 GPD1P21695 349 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RFC1P35251 1148 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 TNFRSF4P43489 277 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 BNIP1Q12981 228 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ARHGEF7Q14155 803 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ATP13A4Q4VNC1 1196 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ACBD5Q5T8D3 534 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 IER5LQ5T953 404 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ACAD10Q6JQN1 1059 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 KRT80Q6KB66 452 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 LRRC74BQ6ZQY2 392 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 Q6ZS52 159 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 PIGWQ7Z7B1 504 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 GRIN3AQ8TCU5 1115 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF75CPQ92670 426 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 TWNKQ96RR1 684 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 SLC22A12Q96S37 553 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 STRA6Q9BX79 667 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 AKAP7Q9P0M2 348 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 SAE1Q9UBE0 346 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 NDC80O14777 642 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 CST8O60676 142 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RETP07949 1114 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ACADSP16219 412 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 TACR2P21452 398 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 INCA1Q0VD86 236 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 PUM1Q14671 1186 aaKnown RBP eCLIP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RASA2Q15283 850 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 CHI3L2Q15782 390 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 FAM182AQ5T1J6 154 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 MROH9Q5TGP6 573 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 EMC10Q5UCC4 262 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 SYDE1Q6ZW31 735 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RAPH1Q70E73 1250 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RASGEF1CQ8N431 466 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 POU5F2Q8N7G0 328 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF366Q8N895 744 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 FAM71DQ8N9W8 422 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 CYB5D2Q8WUJ1 264 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 HSPA12BQ96MM6 686 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF317Q96PQ6 595 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RNF38Q9H0F5 515 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 FBXO6Q9NRD1 293 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 NKX1-2Q9UD57 310 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ERVW-1Q9UQF0 538 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 STON1Q9Y6Q2 735 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RP1L1Q8IWN7 2480 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 A0A1B0GVM2 712 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 A0A1W2PPM1 405 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 TCAF2A6NFQ2 919 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 C5orf60A6NFR6 353 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 TRIM49D1C9J1S8 452 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ZW10O43264 779 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 SLC4A1P02730 911 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 APRTP07741 180 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ALPPL2P10696 532 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 TCN1P20061 433 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 HOXD13P35453 343 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RPS9P46781 194 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 SLC6A11P48066 632 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 NOVA1P51513 510 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 EPHA5P54756 1037 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 WNT7BP56706 349 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 EIF3EP60228 445 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 SLC34A1Q06495 639 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 FCHO2Q0JRZ9 810 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 UBAP2Q5T6F2 1119 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 TTC39BQ5VTQ0 682 aaPredicted RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 PMF1Q6P1K2 205 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RD3Q7Z3Z2 195 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 KBTBD6Q86V97 674 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 MMAAQ8IVH4 418 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ADGRG2Q8IZP9 1017 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 CYP4X1Q8N118 509 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 FBXO36Q8NEA4 188 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 CEP76Q8TAP6 659 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 MAGEC3Q8TD91 643 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 ART4Q93070 314 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 FEM1CQ96JP0 617 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 PAFAH2Q99487 392 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 WWP1Q9H0M0 922 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 SDCBP2Q9H190 292 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 RAB6BQ9NRW1 208 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 VPS45Q9NRW7 570 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 LRCH1Q9Y2L9 728 aa6.06□□□□□ -1.44
SHQ1-205ENST00000468371 MTO1Q9Y2Z2 717 aaKnown RBP6.06□□□□□ -1.44
SHQ1-205ENST00000468371 PCDHA3Q9Y5H8 950 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms