RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ANXA9O76027 345 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 AP2A1O95782 977 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 GSRP00390 522 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ZNF24P17028 368 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 TARSP26639 723 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 RECQLP46063 649 aaPredicted RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 CARSP49589 748 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 DRG2P55039 364 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PLTPP55058 493 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 STARD6P59095 220 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 SKOR1P84550 965 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 SFSWAPQ12872 951 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 MPP3Q13368 585 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ENPP2Q13822 863 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 SPARCL1Q14515 664 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 KCTD11Q693B1 232 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 HIBCHQ6NVY1 386 aaPredicted RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 NCEH1Q6PIU2 408 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PPIL6Q8IXY8 311 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 GPR161Q8N6U8 529 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 CHST14Q8NCH0 376 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 IPMKQ8NFU5 416 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 FBXO25Q8TCJ0 367 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 GRIN3AQ8TCU5 1115 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 MRGPRX2Q96LB1 330 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ZDHHC6Q9H6R6 413 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 VPS45Q9NRW7 570 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ADAM21Q9UKJ8 722 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PCDHGC4Q9Y5F7 938 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 STON1Q9Y6Q2 735 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 EDDM13A0A1B0GTR0 161 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 KANSL1LA0AUZ9 987 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 NPC1O15118 1278 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 SIN3BO75182 1162 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PIGNO95427 931 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ITIH2P19823 946 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 GRIA1P42261 906 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 MAGEA6P43360 314 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 TRPC1P48995 793 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 AP1S1P61966 158 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 MTM1Q13496 603 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 HLTFQ14527 1009 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 UBXN2BQ14CS0 331 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 MORF4L2Q15014 288 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 MYLK3Q32MK0 819 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 FBXO43Q4G163 708 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 C9orf64Q5T6V5 341 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PCGF5Q86SE9 256 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 CAMK1DQ8IU85 385 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 KLHDC8BQ8IXV7 354 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 IFT20Q8IY31 132 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ZNF687Q8N1G0 1237 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ARL10Q8N8L6 244 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 TXNDC5Q8NBS9 432 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 LSM14AQ8ND56 463 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 RPLP0P6Q8NHW5 317 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PRCCQ92733 491 aaPredicted RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 TADA1Q96BN2 335 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 SHDQ96IW2 340 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 RMDN2Q96LZ7 410 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 FSD1LQ9BXM9 530 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 FOXQ1Q9C009 403 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 NEUROG2Q9H2A3 272 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 FAM114A2Q9NRY5 505 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 PIH1D1Q9NWS0 290 aaKnown RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 ANAPC5Q9UJX4 755 aa6.93□□□□□ -1.3
SCAF4-204ENST00000467731 MTF2Q9Y483 593 aaPredicted RBP6.93□□□□□ -1.3
SCAF4-204ENST00000467731 NUMA1Q14980 2115 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ADAM23O75077 832 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 CTSLP07711 333 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 CHRNB1P11230 501 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 TPSB2P20231 275 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 CES1P23141 567 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ECHS1P30084 290 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 NTSR1P30989 418 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 CSNK1DP48730 415 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 GEMP55040 296 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 WNT3AP56704 352 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 VSNL1P62760 191 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 TRAF2Q12933 501 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 TMED1Q13445 227 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 TPSAB1Q15661 275 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 RALGPS1Q5JS13 557 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 KDELC1Q6UW63 502 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ZDHHC24Q6UX98 284 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 Q6ZS52 159 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 HOOK3Q86VS8 718 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 PLPP6Q8IY26 295 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 STK40Q8N2I9 435 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 PDCD6IPQ8WUM4 868 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ART4Q93070 314 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 PPP1R2P1Q96PQ5 205 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 APOL2Q9BQE5 337 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 TDRD1Q9BXT4 1180 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 LRRC40Q9H9A6 602 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 LTB4R2Q9NPC1 389 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 EIF2B3Q9NR50 452 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ARGLU1Q9NWB6 273 aaPredicted RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 NFU1Q9UMS0 254 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 SHOC2Q9UQ13 582 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms