RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 A0A1W2PQU0 124 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 LNP1A1A4G5 178 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 FAM47DPA6NHR8 397 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 PATE3B3GLJ2 98 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 TSPAN6O43657 245 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 FZD6O60353 706 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 RNGTTO60942 597 aaKnown RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 FSBPO95073 299 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 PGLSO95336 258 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 CES1P23141 567 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 SKOR1P84550 965 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 RALGDSQ12967 914 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 CCDC6Q16204 474 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 UGP2Q16851 508 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 SEL1L3Q68CR1 1132 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 TCEAL6Q6IPX3 200 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 KIAA1161Q6NSJ0 714 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 SLC23A3Q6PIS1 610 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 PRR23CQ6ZRP0 262 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 B4GALNT4Q76KP1 1039 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 ZC3H18Q86VM9 953 aaKnown RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 CDKL3Q8IVW4 592 aaPredicted RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 ZCCHC9Q8N567 271 aaKnown RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 TMEM145Q8NBT3 493 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 SLC35B2Q8TB61 432 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 TCEAL3Q969E4 200 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 TEKT5Q96M29 485 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 MCCC1Q96RQ3 725 aaPredicted RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 VAT1Q99536 393 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 TDRD1Q9BXT4 1180 aaKnown RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 CEP41Q9BYV8 373 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 SMOC1Q9H4F8 434 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 TM9SF3Q9HD45 589 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 PCDH12Q9NPG4 1184 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 KCND1Q9NSA2 647 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 EIF2B4Q9UI10 523 aaKnown RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 DMTF1Q9Y222 760 aa11.14□□□□□ -0.63
MSH5-212ENST00000467319 R3HDM2Q9Y2K5 976 aaKnown RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3DA0A087WVF3 549 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3IA0A087WXS9 549 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3EA0A087X179 549 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3KA0A087X1G2 549 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 A0A1B0GTW7 788 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 A0A1W2PQ67 120 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 GOLGA6L9A6NEM1 432 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3FA6NER0 549 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3LB9A6J9 549 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 KCNK3O14649 394 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 BCAT2O15382 392 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 FOXD2O60548 495 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 ZNF189O75820 626 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 CPP00450 1065 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 SERPINF2P08697 491 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3HP0C7X1 549 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 RBP3P10745 1247 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 MAOBP27338 520 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 CD68P34810 354 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 PI4KAP42356 2102 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 GRIA4P48058 902 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 EIF3EP60228 445 aaKnown RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 RPS21P63220 83 aaKnown RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 ELP6Q0PNE2 266 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 FGL2Q14314 439 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 SF3A2Q15428 464 aaKnown RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 SIX1Q15475 284 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 TMEM52BQ4KMG9 183 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 SETMARQ53H47 684 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 TEX44Q53QW1 395 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 SEL1L2Q5TEA6 688 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 CCDC181Q5TID7 509 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3GQ6DHY5 549 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3CQ6IPX1 549 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 NAPEPLDQ6IQ20 393 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 PRPF39Q86UA1 669 aaKnown RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 ALYREFQ86V81 257 aaKnown RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 SLC13A5Q86YT5 568 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 TBC1D3Q8IZP1 549 aaPredicted RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 ZNF567Q8N184 647 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 GPR161Q8N6U8 529 aaKnown RBP11.13□□□□□ -0.63
MSH5-212ENST00000467319 TTC13Q8NBP0 860 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 CEP76Q8TAP6 659 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 HTR3CQ8WXA8 447 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 ASB12Q8WXK4 309 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 SNX19Q92543 992 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 SLC6A18Q96N87 628 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 AGAP3Q96P47 875 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TRIB3Q96RU7 358 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 FAM118BQ9BPY3 351 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 HINFPQ9BQA5 517 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 C1QTNF2Q9BXJ5 285 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 SLC25A51Q9H1U9 297 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 SEPT10Q9P0V9 454 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 JRKLQ9Y4A0 524 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TTLL3Q9Y4R7 772 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 PCDHGC4Q9Y5F7 938 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 RAI2Q9Y5P3 530 aa11.13□□□□□ -0.63
MSH5-212ENST00000467319 TP53BP1Q12888 1972 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms