RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 HSPH1Q92598 858 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 NPLQ9BXD5 320 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-205ENST00000466606 TTYH1Q9H313 450 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-205ENST00000466606 MYH16Q9H6N6 1097 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 SUFUQ9UMX1 484 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 KNSTRNQ9Y448 316 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 SLC4A4Q9Y6R1 1079 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 UNC79Q9P2D8 2635 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 NALCNQ8IZF0 1738 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 RNF123Q5XPI4 1314 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 EVC2Q86UK5 1308 aa4.43□□□□□ -1.7
EDEM3-205ENST00000466606 AKAP12Q02952 1782 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 I6L893 689 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 PER2O15055 1255 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 CYP1A2P05177 515 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 HOXA11P31270 313 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 AVPR1AP37288 418 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 PMS2P54278 862 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 SELENOVP59797 346 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 CHRNDQ07001 517 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 GPR18Q14330 331 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 TWIST1Q15672 202 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 TMEM95Q3KNT9 176 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 BBS12Q6ZW61 710 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 SMAP1Q8IYB5 467 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 PELI3Q8N2H9 469 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 URB1-AS1Q96HZ7 61 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 APOLD1Q96LR9 279 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 PHF7Q9BWX1 381 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 RBM38Q9H0Z9 239 aaKnown RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 TAOK3Q9H2K8 898 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 YTHDC2Q9H6S0 1430 aaKnown RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 ALKBH4Q9NXW9 302 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 GRHL1Q9NZI5 618 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 NCKIPSDQ9NZQ3 722 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 CASZ1Q86V15 1759 aa4.42□□□□□ -1.7
EDEM3-205ENST00000466606 VIRMAQ69YN4 1812 aaKnown RBP4.42□□□□□ -1.7
EDEM3-205ENST00000466606 RREB1Q92766 1687 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 PKD1L2Q7Z442 2459 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 PIK3R4Q99570 1358 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 TTC3P53804 2025 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 CACNA1GO43497 2377 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 XRN1Q8IZH2 1706 aaKnown RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 A0A1B0GVT2 93 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 RPS10-NUDT3A0A1W2PQS6 291 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 NCAM2O15394 837 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 RNMTO43148 476 aaKnown RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 TSPAN3O60637 253 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 CLDN7O95471 211 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 KLKB1P03952 638 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 TBXAS1P24557 533 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 HNRNPA0Q13151 305 aaKnown RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 RAPGEF1Q13905 1077 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 WDR43Q15061 677 aaKnown RBP eCLIP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 RPE65Q16518 533 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 NFIL3Q16649 462 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 WDR45BQ5MNZ6 344 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 DCAF12L2Q5VW00 463 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 HEPHL1Q6MZM0 1159 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 SLC22A25Q6T423 547 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 ADGRG6Q86SQ4 1221 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 SERPINA11Q86U17 422 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 LSM14AQ8ND56 463 aaKnown RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 RASSF8Q8NHQ8 419 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 GABPB2Q8TAK5 448 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 OIT3Q8WWZ8 545 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 RUFY2Q8WXA3 655 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 CNOT9Q92600 299 aaKnown RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 GPR63Q9BZJ6 419 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 EPHX3Q9H6B9 360 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 WDR6Q9NNW5 1121 aaKnown RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 KRCC1Q9NPI7 259 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-205ENST00000466606 ATP8A2Q9NTI2 1148 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 TMEM160Q9NX00 188 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 SEL1LQ9UBV2 794 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 CNPY2Q9Y2B0 182 aa4.41□□□□□ -1.7
EDEM3-205ENST00000466606 EDC4Q6P2E9 1401 aaKnown RBP4.4□□□□□ -1.7
EDEM3-205ENST00000466606 NSD3Q9BZ95 1437 aa4.4□□□□□ -1.7
EDEM3-205ENST00000466606 COL6A3P12111 3177 aa4.4□□□□□ -1.7
EDEM3-205ENST00000466606 LOC102724159A0A0B4J2E5 919 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 FAM157AC9JC47 383 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 CEP104O60308 925 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 SERPINC1P01008 464 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 ALPLP05186 524 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 YWHAQP27348 245 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 PGM1P36871 562 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 ARSFP54793 590 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 CDH12P55289 794 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 FHL1Q13642 323 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 PWP2Q15269 919 aaKnown RBP4.4□□□□□ -1.71
EDEM3-205ENST00000466606 DUSP6Q16828 381 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 Q6ZSV7 163 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 MOB3CQ70IA8 216 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 ZNF367Q7RTV3 350 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 MON1AQ86VX9 555 aa4.4□□□□□ -1.71
EDEM3-205ENST00000466606 CHD1LQ86WJ1 897 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms