RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 TNFSF14O43557 240 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 BUB1BO60566 1050 aaPredicted RBP12.13□□□□□ -0.47
TMCO3-205ENST00000465556 SDC3O75056 442 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 DKK1O94907 266 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 PEX11BO96011 259 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 PAK4O96013 591 aaPredicted RBP12.13□□□□□ -0.47
TMCO3-205ENST00000465556 ATXN1LP0C7T5 689 aaKnown RBP12.13□□□□□ -0.47
TMCO3-205ENST00000465556 ITIH2P19823 946 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 SERPINA4P29622 427 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 IGFALSP35858 605 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 MMP12P39900 470 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 AP1S1P61966 158 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 SLC10A7Q0GE19 358 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 ELP6Q0PNE2 266 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 SGCGQ13326 291 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 ZNF235Q14590 738 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 LBRQ14739 615 aaKnown RBP12.13□□□□□ -0.47
TMCO3-205ENST00000465556 SRLQ86TD4 932 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 SLCO6A1Q86UG4 719 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 ZSWIM9Q86XI8 627 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 CAMK1DQ8IU85 385 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 CHCHD4Q8N4Q1 142 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 CXorf40AQ8TE69 158 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 RFFLQ8WZ73 363 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 BMFQ96LC9 184 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 ZNF641Q96N77 438 aaPredicted RBP12.13□□□□□ -0.47
TMCO3-205ENST00000465556 LENG8Q96PV6 779 aaPredicted RBP12.13□□□□□ -0.47
TMCO3-205ENST00000465556 WRAP53Q9BUR4 548 aaKnown RBP12.13□□□□□ -0.47
TMCO3-205ENST00000465556 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
TMCO3-205ENST00000465556 PCDH12Q9NPG4 1184 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 HS3ST3A1Q9Y663 406 aa12.13□□□□□ -0.47
TMCO3-205ENST00000465556 FPGTO14772 594 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 MAFKO60675 156 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 MMP20O60882 483 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 TM7SF2O76062 418 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 MTA2O94776 668 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 KRT7P08729 469 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 IL4RP24394 825 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 HSPA9P38646 679 aaKnown RBP12.12□□□□□ -0.47
TMCO3-205ENST00000465556 RABIFP47224 123 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 RENBPP51606 427 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 BCL2L1Q07817 233 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 NSUN2Q08J23 767 aaKnown RBP eCLIP12.12□□□□□ -0.47
TMCO3-205ENST00000465556 BNIP3Q12983 259 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 MESDQ14696 234 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 UGP2Q16851 508 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 TMEM52BQ4KMG9 183 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 ATP13A4Q4VNC1 1196 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 NCBP2-AS2Q69YL0 99 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 UNQ6494/PRO21346Q6UXR6 183 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 KDM7AQ6ZMT4 941 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 Q6ZSR6 202 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 DCP2Q8IU60 420 aaKnown RBP12.12□□□□□ -0.47
TMCO3-205ENST00000465556 EID2Q8N6I1 236 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 TC2NQ8N9U0 490 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 PCDH19Q8TAB3 1148 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 HCAR2Q8TDS4 363 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 GATA6Q92908 595 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 FAF2Q96CS3 445 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 ECHDC3Q96DC8 303 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 CNDP2Q96KP4 475 aaKnown RBP12.12□□□□□ -0.47
TMCO3-205ENST00000465556 MGME1Q9BQP7 344 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 C1QTNF7Q9BXJ2 289 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 ATP8A1Q9Y2Q0 1164 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 SCN8AQ9UQD0 1980 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 PKD1L2Q7Z442 2459 aa12.12□□□□□ -0.47
TMCO3-205ENST00000465556 COL27A1Q8IZC6 1860 aaPredicted RBP12.11□□□□□ -0.47
TMCO3-205ENST00000465556 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 ENC1O14682 589 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 SOCS5O75159 536 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 PIAS2O75928 621 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 PRKCGP05129 697 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 C6P13671 934 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 CR2P20023 1033 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 MMP13P45452 471 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 SCNN1BP51168 640 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 PFN3P60673 137 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 GALNT2Q10471 571 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 FZD2Q14332 565 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 PAFAH1B3Q15102 231 aaKnown RBP12.11□□□□□ -0.47
TMCO3-205ENST00000465556 PDK2Q15119 407 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 IRF4Q15306 451 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 ANKRD20A8PQ5CZ79 823 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 TPRG1LQ5T0D9 272 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 ERAP2Q6P179 960 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 PARGQ86W56 976 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 RHOT2Q8IXI1 618 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 BBS5Q8N3I7 341 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 PAF1Q8N7H5 531 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 TP53I13Q8NBR0 393 aaPredicted RBP12.11□□□□□ -0.47
TMCO3-205ENST00000465556 KCTD6Q8NC69 237 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 SLC35G2Q8TBE7 412 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 NSMCE1Q8WV22 266 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 IFT43Q96FT9 208 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 NSMCE3Q96MG7 304 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 CAAP1Q9H8G2 361 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 DNAJC28Q9NX36 388 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 COQ6Q9Y2Z9 468 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 MSRB2Q9Y3D2 182 aa12.11□□□□□ -0.47
TMCO3-205ENST00000465556 DMXL2Q8TDJ6 3036 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms