RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PLPP6Q8IY26 295 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 SH2D3CQ8N5H7 860 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 PCDH20Q8N6Y1 951 aaKnown RBP17.68■□□□□ 0.42
CPSF4-209ENST00000465132 OR52K2Q8NGK3 314 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 MTG2Q9H4K7 406 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 CCDC86Q9H6F5 360 aaKnown RBP17.68■□□□□ 0.42
CPSF4-209ENST00000465132 SGK2Q9HBY8 427 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 SEPT3Q9UH03 358 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 BTBD3Q9Y2F9 522 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 ANKRD6Q9Y2G4 727 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 ATP9BO43861 1147 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 MAFKO60675 156 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 RNASEH1O60930 286 aaKnown RBP17.67■□□□□ 0.42
CPSF4-209ENST00000465132 ZMPSTE24O75844 475 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 EIF3EP60228 445 aaKnown RBP17.67■□□□□ 0.42
CPSF4-209ENST00000465132 SNRPD1P62314 119 aaKnown RBP17.67■□□□□ 0.42
CPSF4-209ENST00000465132 OTUD4Q01804 1114 aaKnown RBP17.67■□□□□ 0.42
CPSF4-209ENST00000465132 LBRQ14739 615 aaKnown RBP17.67■□□□□ 0.42
CPSF4-209ENST00000465132 GRM3Q14832 879 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 NUMA1Q14980 2115 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 CCNG2Q16589 344 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 RALGPS1Q5JS13 557 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 TMPRSS7Q7RTY8 843 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 ACTL9Q8TC94 416 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 MYO19Q96H55 970 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 OLFM3Q96PB7 478 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 PPP1R2P1Q96PQ5 205 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 ORAI3Q9BRQ5 295 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 CINPQ9BW66 212 aaPredicted RBP17.67■□□□□ 0.42
CPSF4-209ENST00000465132 RSPH9Q9H1X1 276 aaPredicted RBP17.67■□□□□ 0.42
CPSF4-209ENST00000465132 GPSM3Q9Y4H4 160 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 DMXL2Q8TDJ6 3036 aa17.67■□□□□ 0.42
CPSF4-209ENST00000465132 ALOX15BO15296 676 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 SNAP91O60641 907 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 IGSF6O95976 241 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 RBP3P10745 1247 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 CCNB1P14635 433 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 STIP1P31948 543 aaKnown RBP17.66■□□□□ 0.42
CPSF4-209ENST00000465132 ACTN2P35609 894 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 RHOAP61586 193 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 CKAP4Q07065 602 aaKnown RBP17.66■□□□□ 0.42
CPSF4-209ENST00000465132 NSUN2Q08J23 767 aaKnown RBP eCLIP17.66■□□□□ 0.42
CPSF4-209ENST00000465132 LLGL1Q15334 1064 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 DLG2Q15700 870 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 HNRNPA1L2Q32P51 320 aaKnown RBP17.66■□□□□ 0.42
CPSF4-209ENST00000465132 SLC45A4Q5BKX6 768 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 DARS2Q6PI48 645 aaKnown RBP17.66■□□□□ 0.42
CPSF4-209ENST00000465132 LAYNQ6UX15 382 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 USP30Q70CQ3 517 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 ZC3H18Q86VM9 953 aaKnown RBP17.66■□□□□ 0.42
CPSF4-209ENST00000465132 ZNF592Q92610 1267 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 LRRC45Q96CN5 670 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 RPL10LQ96L21 214 aaKnown RBP17.66■□□□□ 0.42
CPSF4-209ENST00000465132 RUNDC3BQ96NL0 473 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 PABPC3Q9H361 631 aaKnown RBP17.66■□□□□ 0.42
CPSF4-209ENST00000465132 TRHDEQ9UKU6 1024 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 SCML1Q9UN30 329 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 SHROOM3Q8TF72 1996 aa17.66■□□□□ 0.42
CPSF4-209ENST00000465132 ATRXP46100 2492 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 NYNRINQ9P2P1 1898 aaKnown RBP17.65■□□□□ 0.42
CPSF4-209ENST00000465132 PLXNB3Q9ULL4 1909 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 H0Y8X5 98 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 KRIT1O00522 736 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 PCDHGA12O60330 932 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 SIN3BO75182 1162 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 GSRP00390 522 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 IGHV4-34P06331 123 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 SRCP12931 536 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 CTSKP43235 329 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 MMP13P45452 471 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 CCT8P50990 548 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 ARF5P84085 180 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 CCDC15Q0P6D6 951 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 KIAA0895LQ68EN5 471 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 AADACL2Q6P093 401 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 DRICH1Q6PGQ1 229 aaPredicted RBP17.65■□□□□ 0.42
CPSF4-209ENST00000465132 MDM1Q8TC05 714 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 LRIG1Q96JA1 1093 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 MRGPRX3Q96LB0 322 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 GDAP1L1Q96MZ0 367 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 QKIQ96PU8 341 aaKnown RBP eCLIP17.65■□□□□ 0.42
CPSF4-209ENST00000465132 PDFQ9HBH1 243 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 MFHAS1Q9Y4C4 1052 aa17.65■□□□□ 0.42
CPSF4-209ENST00000465132 GOLGA8CPA6NN73 597 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 ESPNB1AK53 854 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 J3KR12 359 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 TNFSF14O43557 240 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 PECAM1P16284 738 aaPredicted RBP17.64■□□□□ 0.41
CPSF4-209ENST00000465132 CA4P22748 312 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 GRK6P43250 576 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 CSNK1DP48730 415 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 IFI35P80217 286 aaPredicted RBP17.64■□□□□ 0.41
CPSF4-209ENST00000465132 ADCY2Q08462 1091 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 SLC10A2Q12908 348 aaPredicted RBP17.64■□□□□ 0.41
CPSF4-209ENST00000465132 ELAVL3Q14576 367 aaKnown RBP17.64■□□□□ 0.41
CPSF4-209ENST00000465132 PRKD1Q15139 912 aaPredicted RBP17.64■□□□□ 0.41
CPSF4-209ENST00000465132 ITPRIPL1Q6GPH6 555 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 C22orf39Q6P5X5 142 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 C19orf48Q6RUI8 117 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms