RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 DCLK2Q8N568 766 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 C12orf50Q8NA57 414 aaPredicted RBP8.34□□□□□ -1.07
PLD3-208ENST00000464586 ACTL9Q8TC94 416 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 LRRN4Q8WUT4 740 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 MAIP1Q8WWC4 291 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 BIRC7Q96CA5 298 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 QKIQ96PU8 341 aaKnown RBP eCLIP8.34□□□□□ -1.07
PLD3-208ENST00000464586 VAT1Q99536 393 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 NUSAP1Q9BXS6 441 aaKnown RBP8.34□□□□□ -1.07
PLD3-208ENST00000464586 MIR1-1HGQ9H1L0 117 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 NOD2Q9HC29 1040 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 SEMA4GQ9NTN9 838 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 TRMT1Q9NXH9 659 aaKnown RBP8.34□□□□□ -1.07
PLD3-208ENST00000464586 SEPT10Q9P0V9 454 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 SAE1Q9UBE0 346 aaPredicted RBP8.34□□□□□ -1.07
PLD3-208ENST00000464586 EIF2B4Q9UI10 523 aaKnown RBP8.34□□□□□ -1.07
PLD3-208ENST00000464586 PILRBQ9UKJ0 227 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 DMTF1Q9Y222 760 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 ATP8A1Q9Y2Q0 1164 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.34□□□□□ -1.07
PLD3-208ENST00000464586 FADS3Q9Y5Q0 445 aa8.34□□□□□ -1.07
PLD3-208ENST00000464586 ATXN2Q99700 1313 aaKnown RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 A0A1W2PPC4 97 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 A0A1W2PQU0 124 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 TTC24A2A3L6 582 aaPredicted RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 UPK3BL1B0FP48 263 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 UPK3BL2E5RIL1 263 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 KHNYNO15037 678 aaKnown RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 HTRA2O43464 458 aaPredicted RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 STK10O94804 968 aaKnown RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 CPP00450 1065 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 IGHV4-34P06331 123 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 RBP3P10745 1247 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 MAOBP27338 520 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 RPS21P63220 83 aaKnown RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 DSC2Q02487 901 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 ZBTB17Q13105 803 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 UGP2Q16851 508 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 TMEM52BQ4KMG9 183 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 SETMARQ53H47 684 aaPredicted RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 ARMC12Q5T9G4 340 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 DARS2Q6PI48 645 aaKnown RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 SLC23A3Q6PIS1 610 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 HORMAD1Q86X24 394 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 CNTD1Q8N815 330 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 CXorf40AQ8TE69 158 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 PDCD6IPQ8WUM4 868 aaKnown RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 HTR3CQ8WXA8 447 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 VOPP1Q96AW1 172 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 SKA1Q96BD8 255 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 ECHDC3Q96DC8 303 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 TEKT5Q96M29 485 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 AGAP3Q96P47 875 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 HERPUD2Q9BSE4 406 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 TLR10Q9BXR5 811 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 FRMD8P1Q9BZ68 369 aaPredicted RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 GLOD4Q9HC38 313 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 TMEM74BQ9NUR3 256 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 TRHDEQ9UKU6 1024 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 PHTF1Q9UMS5 762 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 SLC6A14Q9UN76 642 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 JRKLQ9Y4A0 524 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 PCDHGC4Q9Y5F7 938 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 RAI2Q9Y5P3 530 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 FRYLO94915 3013 aa8.33□□□□□ -1.08
PLD3-208ENST00000464586 ASCC3Q8N3C0 2202 aaKnown RBP8.33□□□□□ -1.08
PLD3-208ENST00000464586 SCN8AQ9UQD0 1980 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 CFAP69A5D8W1 941 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 C10orf142B7Z368 130 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 PRAMEF26H0Y7S4 382 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 TRAFD1O14545 582 aaPredicted RBP8.32□□□□□ -1.08
PLD3-208ENST00000464586 RIOK3O14730 519 aaKnown RBP8.32□□□□□ -1.08
PLD3-208ENST00000464586 AREL1O15033 823 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 BCAT2O15382 392 aaPredicted RBP8.32□□□□□ -1.08
PLD3-208ENST00000464586 LATO43561 262 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 MAGEC1O60732 1142 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 GJB3O75712 270 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 TM7SF2O76062 418 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 CFIP05156 583 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 SYPP08247 313 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 CYP2A6P11509 494 aaPredicted RBP8.32□□□□□ -1.08
PLD3-208ENST00000464586 PTPN3P26045 913 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 RBL1P28749 1068 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 MAT2AP31153 395 aaKnown RBP8.32□□□□□ -1.08
PLD3-208ENST00000464586 EPHB1P54762 984 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 PPP2CBP62714 309 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 RACK1P63244 317 aaKnown RBP8.32□□□□□ -1.08
PLD3-208ENST00000464586 PPP2CAP67775 309 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 FAM193AP78312 1265 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 NIPAL4Q0D2K0 466 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 TRAF2Q12933 501 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 SGCGQ13326 291 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
PLD3-208ENST00000464586 TEAD4Q15561 434 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 SLC14A2Q15849 920 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 CCDC6Q16204 474 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 TRIM61Q5EBN2 209 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 NAPEPLDQ6IQ20 393 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 PRR23CQ6ZRP0 262 aa8.32□□□□□ -1.08
PLD3-208ENST00000464586 B4GALNT4Q76KP1 1039 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms