RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 HERC6Q8IVU3 1022 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 OFCC1Q8IZS5 231 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 CLHC1Q8NHS4 586 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 NR1H4Q96RI1 486 aaPredicted RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 MRPL57Q9BQC6 102 aaKnown RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 FZD8Q9H461 694 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 RIBC2Q9H4K1 309 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 GLOD4Q9HC38 313 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 SH3BP4Q9P0V3 963 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 TEX264Q9Y6I9 313 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ABCA3Q99758 1704 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 SLIT2O94813 1529 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 MYO7AQ13402 2215 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 MAP3K13O43283 966 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 TYROBPO43914 113 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 USP2O75604 605 aaPredicted RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 DLGAP3O95886 979 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 PTPN3P26045 913 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 S100A5P33763 92 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 HSPA14Q0VDF9 509 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 DCTN2Q13561 401 aaKnown RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 SNX17Q15036 470 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 GCNT7Q6ZNI0 430 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 NECAB2Q7Z6G3 386 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ZDHHC13Q8IUH4 622 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 LZTR1Q8N653 840 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 BPIFB6Q8NFQ5 453 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 TPD52L3Q96J77 140 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ZFRQ96KR1 1074 aaKnown RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 POLR1EQ9GZS1 481 aaKnown RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 CATSPERZQ9NTU4 200 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 RRN3Q9NYV6 651 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 RPL26L1Q9UNX3 145 aaKnown RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 PCDHB5Q9Y5E4 795 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ATRNL1Q5VV63 1379 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 CICQ96RK0 1608 aaPredicted RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 A0A087WXM4 84 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 DHRS12A0PJE2 317 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 OR51F1A6NGY5 319 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 C5orf58C9J3I9 102 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 NRP2O60462 931 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 RGS20O76081 388 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 TOMM70O94826 608 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 CYBBP04839 570 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 DARSP14868 501 aaKnown RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 XRCC1P18887 633 aaPredicted RBP9.14□□□□□ -0.95
HPS4-208ENST00000464362 ACTR3P61158 418 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ITGADQ13349 1161 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 NAB1Q13506 487 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 AP5B1Q2VPB7 878 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 WDTC1Q8N5D0 677 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 SCAMP5Q8TAC9 235 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 SPPL2AQ8TCT8 520 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 CRYGNQ8WXF5 182 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 CYP2S1Q96SQ9 504 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ZNF556Q9HAH1 456 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ZFYVE28Q9HCC9 887 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 CYTH4Q9UIA0 394 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ADAM28Q9UKQ2 775 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 DOLKQ9UPQ8 538 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 ATP11BQ9Y2G3 1177 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 PCDHB7Q9Y5E2 793 aa9.14□□□□□ -0.95
HPS4-208ENST00000464362 MYOCOSA0A1B0GUC4 107 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.13□□□□□ -0.95
HPS4-208ENST00000464362 PMM2O15305 246 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 DNAJA2O60884 412 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 AP2A1O95782 977 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 CTPS1P17812 591 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 ITGALP20701 1170 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 SERPINB1P30740 379 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 CLCNKBP51801 687 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 THOP1P52888 689 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 DSC2Q02487 901 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 ADRM1Q16186 407 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 TTLL9Q3SXZ7 439 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 ZNF280DQ6N043 979 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 CAMK1DQ8IU85 385 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 TMEM169Q96HH4 297 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 PCED1BQ96HM7 432 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 PANX3Q96QZ0 392 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 CNGB3Q9NQW8 809 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 ABCC13Q9NSE7 274 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 FAM105AQ9NUU6 356 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 ZNF180Q9UJW8 692 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 ANAPC2Q9UJX6 822 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 RAD54BQ9Y620 910 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 CCDC189A1A4V9 331 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 GCATO75600 419 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 DLG1Q12959 904 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 PPP1R8Q12972 351 aaKnown RBP9.13□□□□□ -0.95
HPS4-208ENST00000464362 CPSF6Q16630 551 aaKnown RBP eCLIP9.13□□□□□ -0.95
HPS4-208ENST00000464362 ZC3H12BQ5HYM0 836 aaKnown RBP9.13□□□□□ -0.95
HPS4-208ENST00000464362 IQSEC1Q6DN90 963 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 PKN3Q6P5Z2 889 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 AAGABQ6PD74 315 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 ARHGAP36Q6ZRI8 547 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 ZNF621Q6ZSS3 439 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 GPR142Q7Z601 462 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 PNPLA1Q8N8W4 532 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms