RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 CCDC68Q9H2F9 335 aa8.79□□□□□ -1
SHQ1-203ENST00000463369 UGT1A7Q9HAW7 530 aa8.79□□□□□ -1
SHQ1-203ENST00000463369 UGT1A10Q9HAW8 530 aa8.79□□□□□ -1
SHQ1-203ENST00000463369 UGT1A8Q9HAW9 530 aa8.79□□□□□ -1
SHQ1-203ENST00000463369 CLK4Q9HAZ1 481 aaKnown RBP8.79□□□□□ -1
SHQ1-203ENST00000463369 TCF7L1Q9HCS4 588 aa8.79□□□□□ -1
SHQ1-203ENST00000463369 NCKIPSDQ9NZQ3 722 aa8.79□□□□□ -1
SHQ1-203ENST00000463369 SAE1Q9UBE0 346 aaPredicted RBP8.79□□□□□ -1
SHQ1-203ENST00000463369 VPS28Q9UK41 221 aa8.79□□□□□ -1
SHQ1-203ENST00000463369 PACSIN3Q9UKS6 424 aa8.79□□□□□ -1
SHQ1-203ENST00000463369 KIAA0100Q14667 2235 aaKnown RBP8.78□□□□□ -1
SHQ1-203ENST00000463369 GOLGA8IPA6NC78 632 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 GOLGA8JA6NMD2 632 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 H0YCG3 227 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 TRDMT1O14717 391 aaKnown RBP8.78□□□□□ -1
SHQ1-203ENST00000463369 MCF2LO15068 1137 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 SLC16A4O15374 487 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 DCXO43602 365 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 MT-CO1P00395 513 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 CYP11A1P05108 521 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 PABPC1P11940 636 aaKnown RBP8.78□□□□□ -1
SHQ1-203ENST00000463369 RHCEP18577 417 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 EPHA3P29320 983 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 CLCN3P51790 818 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 ACLYP53396 1101 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 OTUD4Q01804 1114 aaKnown RBP8.78□□□□□ -1
SHQ1-203ENST00000463369 RHDQ02161 417 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 GCNT1Q02742 428 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 LAMTOR4Q0VGL1 99 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 KLF10Q13118 480 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 PWP1Q13610 501 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 DPYSQ14117 519 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 FSCBQ5H9T9 825 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 METTL21CQ5VZV1 264 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 SPOPLQ6IQ16 392 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 XKR5Q6UX68 686 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 LYSMD3Q7Z3D4 306 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 PHF13Q86YI8 300 aaPredicted RBP8.78□□□□□ -1
SHQ1-203ENST00000463369 ADGRF2Q8IZF7 708 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 ACTL9Q8TC94 416 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 CCDC127Q96BQ5 260 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 CCDC138Q96M89 665 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 TDRD1Q9BXT4 1180 aaKnown RBP8.78□□□□□ -1
SHQ1-203ENST00000463369 DRC3Q9H069 523 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 RNF208Q9H0X6 261 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 BRD9Q9H8M2 597 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 PARVAQ9NVD7 372 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 ATAD3AQ9NVI7 634 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 PNPOQ9NVS9 261 aa8.78□□□□□ -1
SHQ1-203ENST00000463369 SMIM35A0A1B0GVV1 85 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 C17orf102A2RUQ5 167 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 TMEM191CA6NGB0 347 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 NEMP1O14524 444 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 B3GALNT1O75752 331 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 KRT38O76015 456 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 TMEM191BP0C7N4 346 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 FGF3P11487 239 aaPredicted RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 CCDC130P13994 396 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 NELFEP18615 380 aaKnown RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 XRCC1P18887 633 aaPredicted RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 GABRB3P28472 473 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 BMXP51813 675 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 THOP1P52888 689 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 CDH15P55291 814 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 SNRPFP62306 86 aaKnown RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 RPL7AP62424 266 aaKnown RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 NOMO3P69849 1222 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 MS4A2Q01362 244 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 CD300CQ08708 224 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 BMPR2Q13873 1038 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 CAPSQ13938 189 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 DPYSL3Q14195 570 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 PPP2R5DQ14738 602 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 SLC14A2Q15849 920 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 SNRNP35Q16560 246 aaKnown RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 NRF1Q16656 503 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 RGS21Q2M5E4 152 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 PIGGQ5H8A4 983 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 STXBP5Q5T5C0 1151 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 TXNRD3NBQ6F5E7 133 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 KRT80Q6KB66 452 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 C16orf89Q6UX73 402 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 TRIM72Q6ZMU5 477 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 CBWD2Q8IUF1 395 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 UNC45BQ8IWX7 931 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 CPNE9Q8IYJ1 553 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 KIAA0319LQ8IZA0 1049 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 BHLHE22Q8NFJ8 381 aaPredicted RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 ZNF420Q8TAQ5 688 aaPredicted RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 PPP1R13LQ8WUF5 828 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 DEFB118Q96PH6 123 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 CDRT15Q96T59 188 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 DOK1Q99704 481 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 TMEM79Q9BSE2 394 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 BCO2Q9BYV7 579 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 UNKQ9C0B0 810 aaKnown RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 RPF2Q9H7B2 306 aaKnown RBP8.77□□□□□ -1
SHQ1-203ENST00000463369 COQ10BQ9H8M1 238 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 CRTAC1Q9NQ79 661 aa8.77□□□□□ -1
SHQ1-203ENST00000463369 GID8Q9NWU2 228 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms