RNA–Protein interactions for RNA: ENST00000463200.5

LINC00879-202, long intergenic non-protein coding RNA 879, humanhuman

TSL 1 (best) BASIC

Gene LINC00879, Length 1,041 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-202ENST00000463200 SPTLC3Q9NUV7 552 aa12.3□□□□□ -0.44
LINC00879-202ENST00000463200 DNAJC28Q9NX36 388 aa12.3□□□□□ -0.44
LINC00879-202ENST00000463200 NEUROG3Q9Y4Z2 214 aa12.3□□□□□ -0.44
LINC00879-202ENST00000463200 GOLGA6L6A8MZA4 724 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 ENC1O14682 589 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 INSIG1O15503 277 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 HYAL3O43820 417 aaPredicted RBP12.29□□□□□ -0.44
LINC00879-202ENST00000463200 MMP20O60882 483 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 TCF4P15884 667 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 TIMP2P16035 220 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 HTR1BP28222 390 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 SLC1A1P43005 524 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 MMP13P45452 471 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 YPEL5P62699 121 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 FAM193AP78312 1265 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 PDE1CQ14123 709 aaPredicted RBP12.29□□□□□ -0.44
LINC00879-202ENST00000463200 IFI16Q16666 785 aaKnown RBP12.29□□□□□ -0.44
LINC00879-202ENST00000463200 ASTE1Q2TB18 679 aaPredicted RBP12.29□□□□□ -0.44
LINC00879-202ENST00000463200 ANKRD20A8PQ5CZ79 823 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 LRRC73Q5JTD7 316 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 GCNT7Q6ZNI0 430 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 ABI3BPQ7Z7G0 1075 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 PARGQ86W56 976 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 SPATS2Q86XZ4 545 aaKnown RBP12.29□□□□□ -0.44
LINC00879-202ENST00000463200 CAMK1DQ8IU85 385 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 PDCD6IPQ8WUM4 868 aaKnown RBP12.29□□□□□ -0.44
LINC00879-202ENST00000463200 ADAMTS14Q8WXS8 1223 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 RFFLQ8WZ73 363 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 CNTNAP3BQ96NU0 1288 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 PACSIN1Q9BY11 444 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 CNTNAP3Q9BZ76 1288 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 ITM2BQ9Y287 266 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 CA5BQ9Y2D0 317 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 BTBD3Q9Y2F9 522 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 ATP8A1Q9Y2Q0 1164 aa12.29□□□□□ -0.44
LINC00879-202ENST00000463200 COL5A1P20908 1838 aaPredicted RBP12.28□□□□□ -0.44
LINC00879-202ENST00000463200 TSPAN11A1L157 253 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 TMEM8BA6NDV4 472 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 RNF103O00237 685 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 AREL1O15033 823 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 SPOPO43791 374 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 SOCS5O75159 536 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 C1SP09871 688 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 ELFN1P0C7U0 828 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 CYP2A6P11509 494 aaPredicted RBP12.28□□□□□ -0.44
LINC00879-202ENST00000463200 ZFXP17010 805 aaPredicted RBP12.28□□□□□ -0.44
LINC00879-202ENST00000463200 CES1P23141 567 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 MAGEA1P43355 309 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 DAB2P98082 770 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 SLC10A7Q0GE19 358 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 BNIP3Q12983 259 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 DPYSL3Q14195 570 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 LRRC14Q15048 493 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 TMEM52BQ4KMG9 183 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 TXNRD3NBQ6F5E7 133 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 ARHGAP36Q6ZRI8 547 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 CCDC170Q8IYT3 715 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 CHCHD4Q8N4Q1 142 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 PNPLA1Q8N8W4 532 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 CCNYQ8ND76 341 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 BAHD1Q8TBE0 780 aaPredicted RBP12.28□□□□□ -0.44
LINC00879-202ENST00000463200 TSC1Q92574 1164 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 NUDCD1Q96RS6 583 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 DUSP23Q9BVJ7 150 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 PCDH12Q9NPG4 1184 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 KCTD5Q9NXV2 234 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 DDX56Q9NY93 547 aaKnown RBP12.28□□□□□ -0.44
LINC00879-202ENST00000463200 NENFQ9UMX5 172 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 MSRB2Q9Y3D2 182 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 TTLL3Q9Y4R7 772 aa12.28□□□□□ -0.44
LINC00879-202ENST00000463200 LRRD1A4D1F6 860 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 CFAP69A5D8W1 941 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 POM121BA6NF01 834 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 MAFKO60675 156 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 SDC3O75056 442 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 RFPL3O75679 317 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 CPP00450 1065 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 ATXN1LP0C7T5 689 aaKnown RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 HNF1BP35680 557 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 GARSP41250 739 aaKnown RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 BLKP51451 505 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 DUSP3P51452 185 aaPredicted RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 TBX2Q13207 712 aaPredicted RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 PAFAH1B3Q15102 231 aaKnown RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 BZW1Q7L1Q6 419 aaKnown RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 RAB44Q7Z6P3 723 aaPredicted RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 RHOT1Q8IXI2 618 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 TXLNBQ8N3L3 684 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 FAM71BQ8TC56 605 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 GLMNQ92990 594 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 MRFAP1L1Q96HT8 127 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 CALR3Q96L12 384 aaKnown RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 BMFQ96LC9 184 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 SLC13A1Q9BZW2 595 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 POLR1EQ9GZS1 481 aaKnown RBP12.27□□□□□ -0.45
LINC00879-202ENST00000463200 ETNK2Q9NVF9 386 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 NCKIPSDQ9NZQ3 722 aa12.27□□□□□ -0.45
LINC00879-202ENST00000463200 SPASTQ9UBP0 616 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms