RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 PTPRRQ15256 657 aa20.43■□□□□ 0.86
NUP43-205ENST00000463048 CCDC6Q16204 474 aa20.43■□□□□ 0.86
NUP43-205ENST00000463048 OR2T34Q8NGX1 318 aa20.43■□□□□ 0.86
NUP43-205ENST00000463048 MAIP1Q8WWC4 291 aa20.43■□□□□ 0.86
NUP43-205ENST00000463048 NKD2Q969F2 451 aaPredicted RBP20.43■□□□□ 0.86
NUP43-205ENST00000463048 MIR1-1HGQ9H1L0 117 aa20.43■□□□□ 0.86
NUP43-205ENST00000463048 USP29Q9HBJ7 922 aa20.43■□□□□ 0.86
NUP43-205ENST00000463048 CHKBQ9Y259 395 aa20.43■□□□□ 0.86
NUP43-205ENST00000463048 CACNA1HO95180 2353 aa20.43■□□□□ 0.86
NUP43-205ENST00000463048 GOLGA8CPA6NN73 597 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 UPK3BL1B0FP48 263 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 UPK3BL2E5RIL1 263 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 PGRMC1O00264 195 aaKnown RBP20.42■□□□□ 0.86
NUP43-205ENST00000463048 TRAFD1O14545 582 aaPredicted RBP20.42■□□□□ 0.86
NUP43-205ENST00000463048 SLC7A4O43246 635 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 RNGTTO60942 597 aaKnown RBP20.42■□□□□ 0.86
NUP43-205ENST00000463048 PMPCBO75439 489 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 MT-CYBP00156 380 aaPredicted RBP20.42■□□□□ 0.86
NUP43-205ENST00000463048 PDHA1P08559 390 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 CTPS1P17812 591 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 ITPKAP23677 461 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 FAM193AP78312 1265 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 HS1BP3Q53T59 392 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 RALGPS1Q5JS13 557 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 ANKRD20A2Q5SQ80 823 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 ARMC12Q5T9G4 340 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 ANKRD20A1Q5TYW2 823 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 ANKRD20A3Q5VUR7 823 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 LYSMD4Q5XG99 296 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 KIAA0895LQ68EN5 471 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 ALG1LQ6GMV1 187 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 PRUNE1Q86TP1 453 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 PRPF39Q86UA1 669 aaKnown RBP20.42■□□□□ 0.86
NUP43-205ENST00000463048 RASGEF1CQ8N431 466 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 SUMF1Q8NBK3 374 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 IMP4Q96G21 291 aaKnown RBP20.42■□□□□ 0.86
NUP43-205ENST00000463048 ZC3H10Q96K80 434 aaKnown RBP20.42■□□□□ 0.86
NUP43-205ENST00000463048 SMIM14Q96QK8 99 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 WRAP53Q9BUR4 548 aaKnown RBP20.42■□□□□ 0.86
NUP43-205ENST00000463048 SLC25A51Q9H1U9 297 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 PCDH12Q9NPG4 1184 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 DKK3Q9UBP4 350 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 FADS3Q9Y5Q0 445 aa20.42■□□□□ 0.86
NUP43-205ENST00000463048 SPINT1O43278 529 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 SOCS5O75159 536 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 PGLSO95336 258 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 IFNB1P01574 187 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 LMNAP02545 664 aaKnown RBP20.41■□□□□ 0.86
NUP43-205ENST00000463048 TCP1P17987 556 aaKnown RBP20.41■□□□□ 0.86
NUP43-205ENST00000463048 CES1P23141 567 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 KCNJ1P48048 391 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 ETF1P62495 437 aaKnown RBP20.41■□□□□ 0.86
NUP43-205ENST00000463048 UGP2Q16851 508 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 SEL1L3Q68CR1 1132 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 BRAT1Q6PJG6 821 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 CYP2U1Q7Z449 544 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 PRELID2Q8N945 189 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 LPCAT1Q8NF37 534 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 PIGKQ92643 395 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 BIRC7Q96CA5 298 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 VAT1Q99536 393 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 MYOCQ99972 504 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 HINFPQ9BQA5 517 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 ARRDC1-AS1Q9H2J1 176 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 EIF2B4Q9UI10 523 aaKnown RBP20.41■□□□□ 0.86
NUP43-205ENST00000463048 TRHDEQ9UKU6 1024 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 SAR1BQ9Y6B6 198 aa20.41■□□□□ 0.86
NUP43-205ENST00000463048 A0A1W2PQU0 124 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 TSPAN11A1L157 253 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 METTL12A8MUP2 240 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 HTRA2O43464 458 aaPredicted RBP20.4■□□□□ 0.86
NUP43-205ENST00000463048 ETS1P14921 441 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 PSMB4P28070 264 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 EPHB1P54762 984 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 GALNT3Q14435 633 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 OASLQ15646 514 aaKnown RBP20.4■□□□□ 0.86
NUP43-205ENST00000463048 CCNG2Q16589 344 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 FAXCQ5TGI0 409 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 PAPD7Q5XG87 772 aaKnown RBP20.4■□□□□ 0.86
NUP43-205ENST00000463048 ARHGEF18Q6ZSZ5 1173 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 SDK1Q7Z5N4 2213 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 FOXJ1Q92949 421 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 FAM131CQ96AQ9 280 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 ECHDC3Q96DC8 303 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 SPATA13Q96N96 652 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 TDRD1Q9BXT4 1180 aaKnown RBP20.4■□□□□ 0.86
NUP43-205ENST00000463048 FRMD8P1Q9BZ68 369 aaPredicted RBP20.4■□□□□ 0.86
NUP43-205ENST00000463048 SMOC1Q9H4F8 434 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 PCDH9Q9HC56 1237 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 NCDNQ9UBB6 729 aa20.4■□□□□ 0.86
NUP43-205ENST00000463048 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.4■□□□□ 0.86
NUP43-205ENST00000463048 A0A0U1RQS6 177 aa20.39■□□□□ 0.85
NUP43-205ENST00000463048 MMP20O60882 483 aa20.39■□□□□ 0.85
NUP43-205ENST00000463048 IGHV4-34P06331 123 aa20.39■□□□□ 0.85
NUP43-205ENST00000463048 ALPIP09923 528 aa20.39■□□□□ 0.85
NUP43-205ENST00000463048 PRLRP16471 622 aa20.39■□□□□ 0.85
NUP43-205ENST00000463048 POLR2LP62875 67 aaKnown RBP20.39■□□□□ 0.85
NUP43-205ENST00000463048 SYCP2LQ5T4T6 812 aa20.39■□□□□ 0.85
NUP43-205ENST00000463048 DENND2CQ68D51 928 aa20.39■□□□□ 0.85
NUP43-205ENST00000463048 ITPRIPL1Q6GPH6 555 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms