RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 CDK11BP21127 795 aaKnown RBP15.55■□□□□ 0.08
SKA3-204ENST00000462482 HTR7P34969 479 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 MLLT3P42568 568 aaPredicted RBP15.55■□□□□ 0.08
SKA3-204ENST00000462482 ZNF143P52747 638 aaPredicted RBP15.55■□□□□ 0.08
SKA3-204ENST00000462482 CFHR1Q03591 330 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 PTP4A2Q12974 167 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 SERINC3Q13530 473 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 TMEM52BQ4KMG9 183 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 ARHGAP40Q5TG30 622 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 CDKAL1Q5VV42 579 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 GKN2Q86XP6 184 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 DNAAF5Q86Y56 855 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 HID1Q8IV36 788 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 SLC35F3Q8IY50 421 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 PYROXD2Q8N2H3 581 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 SDR16C5Q8N3Y7 309 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 HMCESQ96FZ2 354 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 MCEEQ96PE7 176 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 PCDHB18PQ96TA0 734 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 CCDC3Q9BQI4 270 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 CNPY3Q9BT09 278 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 MAGEB5Q9BZ81 275 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 TCEAL2Q9H3H9 227 aaPredicted RBP15.55■□□□□ 0.08
SKA3-204ENST00000462482 ASCL3Q9NQ33 180 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 MBNL1Q9NR56 388 aaKnown RBP15.55■□□□□ 0.08
SKA3-204ENST00000462482 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.55■□□□□ 0.08
SKA3-204ENST00000462482 NEU3Q9UQ49 428 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 PCDHGA8Q9Y5G5 932 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 TMX2-CTNND1H3BSU7 103 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 CCP110O43303 1012 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 GCATO75600 419 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 COPB1P53618 953 aaKnown RBP15.54■□□□□ 0.08
SKA3-204ENST00000462482 TPI1P60174 286 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 UBXN1Q04323 297 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 VAC14Q08AM6 782 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 IRF4Q15306 451 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 PERM1Q5SV97 790 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 PPP1R2P3Q6NXS1 205 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 BRAT1Q6PJG6 821 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 LVRNQ6Q4G3 990 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 SASS6Q6UVJ0 657 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 RD3Q7Z3Z2 195 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 UMODL1-AS1Q8N2C9 162 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 ARL10Q8N8L6 244 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 TP53I13Q8NBR0 393 aaPredicted RBP15.54■□□□□ 0.08
SKA3-204ENST00000462482 OR6C4Q8NGE1 309 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 WBP1Q96G27 269 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 EXOC2Q96KP1 924 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 ZNF641Q96N77 438 aaPredicted RBP15.54■□□□□ 0.08
SKA3-204ENST00000462482 SLC46A1Q96NT5 459 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 AGPAT1Q99943 283 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 STRADBQ9C0K7 418 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 SUV39H2Q9H5I1 410 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 CPNE5Q9HCH3 593 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 FANCLQ9NW38 375 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 FZD10Q9ULW2 581 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 SIK3Q9Y2K2 1263 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 ENTPD2Q9Y5L3 495 aa15.54■□□□□ 0.08
SKA3-204ENST00000462482 CCDC187A0A096LP49 1063 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 WASH4PA8MWX3 477 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 EPHB6O15197 1021 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 DAPK3O43293 454 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 PIGNO95427 931 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 HK3P52790 923 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 UGP2Q16851 508 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 ENPP7Q6UWV6 458 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 MON1BQ7L1V2 547 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 NETO2Q8NC67 525 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 TUBGCP5Q96RT8 1024 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 CLPBQ9H078 707 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 NOL6Q9H6R4 1146 aaKnown RBP15.53■□□□□ 0.08
SKA3-204ENST00000462482 ATP13A3Q9H7F0 1226 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 WDR70Q9NW82 654 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 SIRPGQ9P1W8 387 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 KLQ9UEF7 1012 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 GPR34Q9UPC5 381 aa15.53■□□□□ 0.08
SKA3-204ENST00000462482 ARHGAP42A6NI28 874 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 LGALS16A8MUM7 142 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 EIF3CLB5ME19 914 aaKnown RBP15.52■□□□□ 0.08
SKA3-204ENST00000462482 C1QL1O75973 258 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 TNFSF15O95150 251 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 TNFP01375 233 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 C6P13671 934 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 FERP16591 822 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 ITIH2P19823 946 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 SERPINA4P29622 427 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 LIG3P49916 1009 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 NDST2P52849 883 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 SRP54P61011 504 aaKnown RBP15.52■□□□□ 0.08
SKA3-204ENST00000462482 MYL5Q02045 173 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 EIF3IQ13347 325 aaKnown RBP15.52■□□□□ 0.08
SKA3-204ENST00000462482 INPP5AQ14642 412 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 NFATC4Q14934 902 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 CYTH1Q15438 398 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 WSCD2Q2TBF2 565 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 PCDH19Q8TAB3 1148 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 TSACCQ96A04 125 aaPredicted RBP15.52■□□□□ 0.08
SKA3-204ENST00000462482 WDR92Q96MX6 357 aa15.52■□□□□ 0.08
SKA3-204ENST00000462482 GFM1Q96RP9 751 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms