RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SUV39H2Q9H5I1 410 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 DHX35Q9H5Z1 703 aaKnown RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 MRPL47Q9HD33 250 aaKnown RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 GPATCH2LQ9NWQ4 482 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 DNAJC28Q9NX36 388 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 UBA2Q9UBT2 640 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 PCSK1NQ9UHG2 260 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 GGT7Q9UJ14 662 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 SALL4Q9UJQ4 1053 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 ITM2BQ9Y287 266 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 BZW2Q9Y6E2 419 aaKnown RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 SCINQ9Y6U3 715 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 DOCK9Q9BZ29 2069 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 DMXL2Q8TDJ6 3036 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 TRPM6Q9BX84 2022 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 URB1O60287 2271 aaKnown RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 ZFHX4Q86UP3 3567 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 A0A087WV48 116 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 LY6G6EA0A0G2JKS1 128 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 K7ESM1 405 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 PRPSAP2O60256 369 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 BUB1BO60566 1050 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 MMP20O60882 483 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 SERPINC1P01008 464 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 GP1BAP07359 652 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 SKILP12757 684 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 ITIH2P19823 946 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 PEX5P50542 639 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 DUSP3P51452 185 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 FANCCQ00597 558 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 INSM1Q01101 510 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 IL10RBQ08334 325 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 ELP6Q0PNE2 266 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 EIF2B5Q13144 721 aaKnown RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 DPYSQ14117 519 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 PDE1CQ14123 709 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 PTK2BQ14289 1009 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 ZNF542PQ5EBM4 170 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 TPRG1LQ5T0D9 272 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 CDCP2Q5VXM1 449 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 BRAT1Q6PJG6 821 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 SRLQ86TD4 932 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 TP53I13Q8NBR0 393 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 NETO2Q8NC67 525 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 CXorf40AQ8TE69 158 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 BTN2A2Q8WVV5 523 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 ECHDC3Q96DC8 303 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 IQCDQ96DY2 449 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 APOLD1Q96LR9 279 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 C1QTNF7Q9BXJ2 289 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 CAAP1Q9H8G2 361 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 CBX8Q9HC52 389 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 NCKIPSDQ9NZQ3 722 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 CWC15Q9P013 229 aaKnown RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 IPO11Q9UI26 975 aaKnown RBP9.25□□□□□ -0.93
BRCA1-207ENST00000461798 KLF15Q9UIH9 416 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 CLCA2Q9UQC9 943 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 RAXQ9Y2V3 346 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 U3KQA8 63 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 CFAP47Q6ZTR5 3102 aa9.25□□□□□ -0.93
BRCA1-207ENST00000461798 TMEM110-MUSTN1A8MSY1 372 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 H3BM21 787 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 FFAR2O15552 330 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 DAPK3O43293 454 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 LZTS3O60299 673 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-207ENST00000461798 OPA1O60313 960 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 PALMO75781 387 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 MT-CO3P00414 261 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 JUNDP17535 347 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 IL1R2P27930 398 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 IGFALSP35858 605 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 RGRP47804 291 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 CLDN6P56747 220 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 TPM4P67936 248 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 ZBED6P86452 979 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 DAB2P98082 770 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 PIGHQ14442 188 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-207ENST00000461798 DPYSL2Q16555 572 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 TMCO4Q5TGY1 634 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 ZCCHC8Q6NZY4 707 aaKnown RBP9.24□□□□□ -0.93
BRCA1-207ENST00000461798 NIPA2Q8N8Q9 360 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 TSEN2Q8NCE0 465 aaKnown RBP9.24□□□□□ -0.93
BRCA1-207ENST00000461798 ZNF548Q8NEK5 533 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-207ENST00000461798 ZNF653Q96CK0 615 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 NXPE2Q96DL1 559 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 CELF6Q96J87 481 aaKnown RBP9.24□□□□□ -0.93
BRCA1-207ENST00000461798 EXOC2Q96KP1 924 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 ZNF599Q96NL3 588 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 PSKH2Q96QS6 385 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 PCDH12Q9NPG4 1184 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 MBNL1Q9NR56 388 aaKnown RBP9.24□□□□□ -0.93
BRCA1-207ENST00000461798 EVA1BQ9NVM1 165 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 SPASTQ9UBP0 616 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 CAPN11Q9UMQ6 739 aa9.24□□□□□ -0.93
BRCA1-207ENST00000461798 SPEGQ15772 3267 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 SYCE3A1L190 88 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 LMO7DNF2Z398 122 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 H3BRJ5 948 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 TRAFD1O14545 582 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 AQP9O43315 295 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms