RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 A8MV72 311 aaPredicted RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 NPIPB11E5RHQ5 1161 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 KIR2DS3K7RE56 304 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 P4HA2O15460 535 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 SEC14L5O43304 696 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 PLOD3O60568 738 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 GJB3O75712 270 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 NKX2-2O95096 273 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 WNT1P04628 370 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 PRKCGP05129 697 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 RB1P06400 928 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 HOXB5P09067 269 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 RRM1P23921 792 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 CERS1P27544 350 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 EPHB2P29323 1055 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 MPGP29372 298 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 GARSP41250 739 aaKnown RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 LMAN1P49257 510 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 MRPL12P52815 198 aaKnown RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 CLDN2P57739 230 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 TFF2Q03403 129 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 SLC18A2Q05940 514 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 FOXF2Q12947 444 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 AIMP2Q13155 320 aaKnown RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 OLIG2Q13516 323 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 PRPF4BQ13523 1007 aaKnown RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 CAPSQ13938 189 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 ARHGEF6Q15052 776 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 MIDNQ504T8 468 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 CEP78Q5JTW2 689 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 C6orf10Q5SRN2 563 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 PLEKHS1Q5SXH7 462 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 MEX3CQ5U5Q3 659 aaKnown RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 FBXO42Q6P3S6 717 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 LCTLQ6UWM7 567 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 CRELD2Q6UXH1 353 aaPredicted RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 ZNF788Q6ZQV5 615 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 FAM83HQ6ZRV2 1179 aaPredicted RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 RD3Q7Z3Z2 195 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 TRIM74Q86UV6 250 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 TRIM73Q86UV7 250 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 PALB2Q86YC2 1186 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 GALNT16Q8N428 558 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 GJC3Q8NFK1 279 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 EME1Q96AY2 570 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 CHFRQ96EP1 664 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 CDT1Q9H211 546 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 THSD1Q9NS62 852 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 PLK2Q9NYY3 685 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 MRPL15Q9P015 296 aaKnown RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 SEL1LQ9UBV2 794 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 AGO2Q9UKV8 859 aaKnown RBP3.3□□□□□ -1.88
VCL-203ENST00000461383 PCSK5Q92824 1860 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 HSPB2A8KAH6 182 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 BTBD18B2RXH4 712 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 KLRF2D3W0D1 207 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 HSPB6O14558 160 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 HS6ST1O60243 411 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 ZC3H11AO75152 810 aaKnown RBP eCLIP3.29□□□□□ -1.88
VCL-203ENST00000461383 DNTTP04053 509 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 CBSLP0DN79 551 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 ENO3P13929 434 aaPredicted RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 ZNF182P17025 639 aaPredicted RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 ACSL1P33121 698 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 CBSP35520 551 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 CENPAP49450 140 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 GALCP54803 685 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 SORDQ00796 357 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 CFHR1Q03591 330 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 GRIK3Q13003 919 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 NAB2Q15742 525 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 HSPB2Q16082 182 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 SMTNL2Q2TAL5 461 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 PRAMEF19Q5SWL8 479 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 SLC30A6Q6NXT4 461 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 KDELC2Q7Z4H8 507 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 UBE2Q1Q7Z7E8 422 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 ANKRD13BQ86YJ7 626 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 DENND6AQ8IWF6 608 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 CCDC13Q8IYE1 715 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 ZDHHC23Q8IYP9 409 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 SLC44A5Q8NCS7 719 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 GABPB2Q8TAK5 448 aaPredicted RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 CEP76Q8TAP6 659 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 MOAP1Q96BY2 351 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 ARHGEF26Q96DR7 871 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 PGAM5Q96HS1 289 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 ZFYVE19Q96K21 471 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 HARBI1Q96MB7 349 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 TMEM68Q96MH6 324 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 ZNF570Q96NI8 536 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 SERINC2Q96SA4 455 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 MXRA8Q9BRK3 442 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 AP1M1Q9BXS5 423 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 IFIH1Q9BYX4 1025 aaKnown RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 GLIS2Q9BZE0 524 aaPredicted RBP3.29□□□□□ -1.88
VCL-203ENST00000461383 B3GNT4Q9C0J1 378 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 IKZF4Q9H2S9 585 aa3.29□□□□□ -1.88
VCL-203ENST00000461383 MAGEE1Q9HCI5 957 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms