RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CDT1Q9H211 546 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 TSPY26PQ9H489 355 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 RGS18Q9NS28 235 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 SACM1LQ9NTJ5 587 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 AGPAT5Q9NUQ2 364 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 GTF2A1LQ9UNN4 478 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 PCDHGB3Q9Y5G1 929 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 ACTL7AQ9Y615 435 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 DGKBQ9Y6T7 804 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 PCSK5Q92824 1860 aa5.04□□□□□ -1.6
ATPAF1-203ENST00000460928 CNTNAP2Q9UHC6 1331 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ANK1P16157 1881 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TRIM49BA6NDI0 452 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TBKBP1A7MCY6 615 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 PPEF2O14830 753 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TGFB1I1O43294 461 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 E2F6O75461 281 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 RECQL4O94761 1208 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TPPPO94811 219 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 DDHD2O94830 711 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 RTN3O95197 1032 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 GJB5O95377 273 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ADRB2P07550 413 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC175P0C221 793 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 VSIG10L2P0DP72 767 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ACTN1P12814 892 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 GYPEP15421 78 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 HDCP19113 662 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 FPR1P21462 350 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 PTGS2P35354 604 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 MLH1P40692 756 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 MATR3P43243 847 aaKnown RBP eCLIP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 CASP4P49662 377 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 CYP2J2P51589 502 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 SOX8P57073 446 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 FAM189BP81408 668 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 GTF2BQ00403 316 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 COL10A1Q03692 680 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 DUSP2Q05923 314 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 PMS2P11Q13670 270 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ACAP1Q15027 740 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ELAVL1Q15717 326 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ARL13BQ3SXY8 428 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 C3orf38Q5JPI3 329 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TTC19Q6DKK2 380 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 PGBD2Q6P3X8 592 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TLDC1Q6P9B6 456 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TMEM173Q86WV6 379 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ZNF280BQ86YH2 543 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC65Q8IXS2 484 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 GSPT2Q8IYD1 628 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC170Q8IYT3 715 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 SYCP3Q8IZU3 236 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 GBP7Q8N8V2 638 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 MAB21L3Q8N8X9 362 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ATP11CQ8NB49 1132 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 NEK11Q8NG66 645 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 KBTBD7Q8WVZ9 684 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 LZICQ8WZA0 190 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TOP1MTQ969P6 601 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 C18orf25Q96B23 403 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 B3GALT6Q96L58 329 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ZMAT2Q96NC0 199 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 CASD1Q96PB1 797 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 MED15Q96RN5 788 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 OSBPL9Q96SU4 736 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 NTPCRQ9BSD7 190 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 TCHPQ9BT92 498 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 KCNH6Q9H252 994 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 CLSTN2Q9H4D0 955 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 EXOC1Q9NV70 894 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 PRMT7Q9NVM4 692 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 SIDT1Q9NXL6 827 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 LARSQ9P2J5 1176 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 DNAJB4Q9UDY4 337 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 AFF4Q9UHB7 1163 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 LCMT1Q9UIC8 334 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 ODF2LQ9ULJ1 636 aa5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 BARX2Q9UMQ3 279 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 MAGED2Q9UNF1 606 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-203ENST00000460928 CITO14578 2027 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 FASNP49327 2511 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PTPRJQ12913 1337 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PHLPP2Q6ZVD8 1323 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 A0A0U1RQF3 1178 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 UBE2QL1A1L167 161 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 LINC01553A4QN01 128 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 GOLGA6L9A6NEM1 432 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TMEM191CA6NGB0 347 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 ARL5CA6NH57 179 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 GOLGA6L19H0YKK7 550 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 I3L4J1 428 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 PTGESO14684 152 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 LIN7AO14910 233 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 HNRNPDLO14979 420 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM189A1O60320 539 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TBC1D4O60343 1298 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 TLR5O60602 858 aa5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 SLU7O95391 586 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-203ENST00000460928 JUNP05412 331 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms