RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 RPL10LQ96L21 214 aaKnown RBP24.61■■□□□ 1.53
U2AF1-204ENST00000459639 MYADMQ96S97 322 aa24.61■■□□□ 1.53
U2AF1-204ENST00000459639 CPNE1Q99829 537 aa24.61■■□□□ 1.53
U2AF1-204ENST00000459639 CLDND1Q9NY35 253 aa24.61■■□□□ 1.53
U2AF1-204ENST00000459639 IL1RAPL1Q9NZN1 696 aa24.61■■□□□ 1.53
U2AF1-204ENST00000459639 PCDHGC4Q9Y5F7 938 aa24.61■■□□□ 1.53
U2AF1-204ENST00000459639 MTCH2Q9Y6C9 303 aa24.61■■□□□ 1.53
U2AF1-204ENST00000459639 TNRC18O15417 2968 aaPredicted RBP24.61■■□□□ 1.53
U2AF1-204ENST00000459639 CDH23Q9H251 3354 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 CCDC78A2IDD5 438 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 ZNF821O75541 412 aaPredicted RBP24.6■■□□□ 1.53
U2AF1-204ENST00000459639 CREB1P16220 341 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 POLR2EP19388 210 aaKnown RBP24.6■■□□□ 1.53
U2AF1-204ENST00000459639 MTHFRP42898 656 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 DGKGP49619 791 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 SNRPD1P62314 119 aaKnown RBP24.6■■□□□ 1.53
U2AF1-204ENST00000459639 DLX2Q07687 328 aaPredicted RBP24.6■■□□□ 1.53
U2AF1-204ENST00000459639 FCHO2Q0JRZ9 810 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 ESRP1Q6NXG1 681 aaKnown RBP24.6■■□□□ 1.53
U2AF1-204ENST00000459639 OR2AP1Q8NGE2 309 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 SMC6Q96SB8 1091 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 EBF3Q9H4W6 596 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 SSU72Q9NP77 194 aaKnown RBP24.6■■□□□ 1.53
U2AF1-204ENST00000459639 NSMCE4AQ9NXX6 385 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 TXNDC16Q9P2K2 825 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 SLC27A6Q9Y2P4 619 aa24.6■■□□□ 1.53
U2AF1-204ENST00000459639 GSRP00390 522 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 CISD3P0C7P0 127 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 POU3F3P20264 500 aaPredicted RBP24.59■■□□□ 1.53
U2AF1-204ENST00000459639 GP5P40197 560 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 DGKKQ5KSL6 1271 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 TEDDM1Q5T9Z0 273 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 MFSD6LQ8IWD5 586 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 ETFBKMTQ8IXQ9 262 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 PCDH20Q8N6Y1 951 aaKnown RBP24.59■■□□□ 1.53
U2AF1-204ENST00000459639 BRSK1Q8TDC3 778 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 RMDN1Q96DB5 314 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 ZFYVE19Q96K21 471 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 CAPS2Q9BXY5 557 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 TTYH1Q9H313 450 aaPredicted RBP24.59■■□□□ 1.53
U2AF1-204ENST00000459639 PSD3Q9NYI0 1048 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.59■■□□□ 1.53
U2AF1-204ENST00000459639 SLC17A6Q9P2U8 582 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 SLC2A6Q9UGQ3 507 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 RIMKLBQ9ULI2 386 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 A0A1W2PPM1 405 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 LDB2O43679 373 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 FZD6O60353 706 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 MDH1P40925 334 aaKnown RBP24.59■■□□□ 1.53
U2AF1-204ENST00000459639 ARCN1P48444 511 aaKnown RBP24.59■■□□□ 1.53
U2AF1-204ENST00000459639 COL19A1Q14993 1142 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 CNGA3Q16281 694 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 GEN1Q17RS7 908 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 HSP90AA5PQ58FG0 334 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 LPCAT1Q8NF37 534 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 BLOC1S5Q8TDH9 187 aa24.59■■□□□ 1.53
U2AF1-204ENST00000459639 EVLQ9UI08 416 aaPredicted RBP24.59■■□□□ 1.53
U2AF1-204ENST00000459639 TMEM120BA0PK00 339 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 TRIM49D1C9J1S8 452 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 SOCS5O75159 536 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 MT-ND3P03897 115 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 PDHA1P08559 390 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 ARNTP27540 789 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 VASPP50552 380 aaPredicted RBP24.58■■□□□ 1.53
U2AF1-204ENST00000459639 GRTP1Q5TC63 336 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 TMEM215Q68D42 235 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 C12orf40Q86WS4 652 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 CNTN4Q8IWV2 1026 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 ELSPBP1Q96BH3 223 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 ALKBH8Q96BT7 664 aaKnown RBP24.58■■□□□ 1.53
U2AF1-204ENST00000459639 MSLNLQ96KJ4 702 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 TNKS2Q9H2K2 1166 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 ECT2Q9H8V3 914 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 SMG5Q9UPR3 1016 aaKnown RBP24.58■■□□□ 1.53
U2AF1-204ENST00000459639 ERVW-1Q9UQF0 538 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 PSAT1Q9Y617 370 aa24.58■■□□□ 1.53
U2AF1-204ENST00000459639 TRIM24O15164 1050 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 PRPF4O43172 522 aaKnown RBP eCLIP24.57■■□□□ 1.52
U2AF1-204ENST00000459639 SHOX2O60902 331 aaPredicted RBP24.57■■□□□ 1.52
U2AF1-204ENST00000459639 SIN3BO75182 1162 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 TULP3O75386 442 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 VAPBO95292 243 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 ASLP04424 464 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 LAMP2P13473 410 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 GBP2P32456 591 aaPredicted RBP24.57■■□□□ 1.52
U2AF1-204ENST00000459639 RPL26P61254 145 aaKnown RBP24.57■■□□□ 1.52
U2AF1-204ENST00000459639 ACVR1Q04771 509 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 BCL2L1Q07817 233 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 GAB4Q2WGN9 574 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 MYO19Q96H55 970 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 TUBGCP5Q96RT8 1024 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 FAM167BQ9BTA0 163 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 ATP13A3Q9H7F0 1226 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 KCNK9Q9NPC2 374 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 HPS4Q9NQG7 708 aa24.57■■□□□ 1.52
U2AF1-204ENST00000459639 IARS2Q9NSE4 1012 aaKnown RBP24.57■■□□□ 1.52
U2AF1-204ENST00000459639 RPL26L1Q9UNX3 145 aaKnown RBP24.57■■□□□ 1.52
U2AF1-204ENST00000459639 ANKRD66B4E2M5 251 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 PGLSO95336 258 aa24.56■■□□□ 1.52
U2AF1-204ENST00000459639 CRTAMO95727 393 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms