RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 NOVA2Q9UNW9 492 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 CHKBQ9Y259 395 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 HS3ST2Q9Y278 367 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 NCKAP1Q9Y2A7 1128 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 FCF1Q9Y324 198 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 USP15Q9Y4E8 981 aaPredicted RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 PCDHB9Q9Y5E1 797 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 RAI2Q9Y5P3 530 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TEX264Q9Y6I9 313 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 BHMG1C9JSJ3 638 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 H3BQ06 376 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 STK25O00506 426 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 POLR3GO15318 223 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 ATG13O75143 517 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 RNF40O75150 1001 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 NDUFS3O75489 264 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TCEA3O75764 348 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TMEM63AO94886 807 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 KAT7O95251 611 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 VAPBO95292 243 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 PAPSS2O95340 614 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 EPHX1P07099 455 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 RALBP11234 206 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 ACADMP11310 421 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZNF30P17039 623 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 DRD1P21728 446 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SP100P23497 879 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 OAS2P29728 719 aaKnown RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 HPDP32754 393 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CD68P34810 354 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SLCO1A2P46721 670 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 POLD2P49005 469 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 NUMBP49757 651 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 VASPP50552 380 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 IRAK1P51617 712 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SUOXP51687 545 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SGSHP51688 502 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 PTPN5P54829 565 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 NRLP54845 237 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SKOR1P84550 965 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 KDSRQ06136 332 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 DNAJC3Q13217 504 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CYTH1Q15438 398 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CTC1Q2NKJ3 1217 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 FBXO43Q4G163 708 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 ANKRD20A4Q4UJ75 823 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TAF1BQ53T94 588 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SIRPB2Q5JXA9 342 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CERCAMQ5T4B2 595 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 RNF187Q5TA31 235 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 KCTD11Q693B1 232 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TRIM68Q6AZZ1 485 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 UGT3A1Q6NUS8 523 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 KLC3Q6P597 504 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 PARM1Q6UWI2 310 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 VITQ6UXI7 678 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 RANBP10Q6VN20 620 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 GDPD4Q6W3E5 623 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 RAPH1Q70E73 1250 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TAS2R42Q7RTR8 314 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CCDC91Q7Z6B0 441 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TTC7BQ86TV6 843 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CAND1Q86VP6 1230 aaKnown RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CHPFQ8IZ52 775 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 STK40Q8N2I9 435 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 DEFB123Q8N688 67 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CNTD1Q8N815 330 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 WBP2Q969T9 261 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 PBXIP1Q96AQ6 731 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CERS2Q96G23 380 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 EXOC2Q96KP1 924 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SIGLEC10Q96LC7 697 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 RANBP9Q96S59 729 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 PAFAH2Q99487 392 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SELENOSQ9BQE4 189 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 FAM83CQ9BQN1 747 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TMEM109Q9BVC6 243 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CDH19Q9H159 772 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 S1PR5Q9H228 398 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TNKS2Q9H2K2 1166 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SUV39H2Q9H5I1 410 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 POMKQ9H5K3 350 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 ACSS3Q9H6R3 686 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 UBE2ZQ9H832 354 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 FBRSQ9HAH7 460 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 ZFYVE1Q9HBF4 777 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 PDFQ9HBH1 243 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TMBIM4Q9HC24 238 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 NOD2Q9HC29 1040 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 MAGEE1Q9HCI5 957 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CHRAC1Q9NRG0 131 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 SYBUQ9NX95 663 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 PKD2L2Q9NZM6 624 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 CLEC1BQ9P126 229 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 EPS15L1Q9UBC2 864 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 LIMD1Q9UGP4 676 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 EVLQ9UI08 416 aaPredicted RBP5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 FBXL21Q9UKT6 434 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 NEU3Q9UQ49 428 aa5.88□□□□□ -1.47
RNU1-88P-201ENST00000459274 TCAF1Q9Y4C2 921 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms