RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PQLC3Q8N755 202 aa18.86■□□□□ 0.61
USP39-209ENST00000458268 VOPP1Q96AW1 172 aa18.86■□□□□ 0.61
USP39-209ENST00000458268 PSKH2Q96QS6 385 aa18.86■□□□□ 0.61
USP39-209ENST00000458268 TUBGCP5Q96RT8 1024 aa18.86■□□□□ 0.61
USP39-209ENST00000458268 BAG1Q99933 345 aaPredicted RBP18.86■□□□□ 0.61
USP39-209ENST00000458268 PCDH12Q9NPG4 1184 aa18.86■□□□□ 0.61
USP39-209ENST00000458268 BTBD3Q9Y2F9 522 aa18.86■□□□□ 0.61
USP39-209ENST00000458268 CACNA1AO00555 2505 aa18.86■□□□□ 0.61
USP39-209ENST00000458268 CABIN1Q9Y6J0 2220 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 A6NNZ2 444 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 C10orf142B7Z368 130 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 APOL1O14791 398 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 TM7SF2O76062 418 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 ADRB1P08588 477 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 GARSP41250 739 aaKnown RBP18.85■□□□□ 0.61
USP39-209ENST00000458268 SLC1A1P43005 524 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 ARRB1P49407 418 aaPredicted RBP18.85■□□□□ 0.61
USP39-209ENST00000458268 AP1S1P61966 158 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 ELP6Q0PNE2 266 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 UGP2Q16851 508 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 FAM182AQ5T1J6 154 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 KAZNQ674X7 775 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 NPNTQ6UXI9 565 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 ZSWIM9Q86XI8 627 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 CCDC50Q8IVM0 306 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 PGBD5Q8N414 524 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 ZNF641Q96N77 438 aaPredicted RBP18.85■□□□□ 0.61
USP39-209ENST00000458268 RNF157Q96PX1 679 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 DDX56Q9NY93 547 aaKnown RBP18.85■□□□□ 0.61
USP39-209ENST00000458268 SEPT10Q9P0V9 454 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 DKK3Q9UBP4 350 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 PCDHGC4Q9Y5F7 938 aa18.85■□□□□ 0.61
USP39-209ENST00000458268 A0A1B0GTQ1 180 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 POM121BA6NF01 834 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 FPGTO14772 594 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 AREL1O15033 823 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 FLRT2O43155 660 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 LZTS3O60299 673 aaPredicted RBP18.84■□□□□ 0.61
USP39-209ENST00000458268 LCA5LO95447 670 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 ZNF883P0CG24 379 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 HSPA9P38646 679 aaKnown RBP18.84■□□□□ 0.61
USP39-209ENST00000458268 CSNK1DP48730 415 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 GALNT2Q10471 571 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 BNIP3Q12983 259 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 TRIP6Q15654 476 aaKnown RBP18.84■□□□□ 0.61
USP39-209ENST00000458268 IFI16Q16666 785 aaKnown RBP18.84■□□□□ 0.61
USP39-209ENST00000458268 ZNF542PQ5EBM4 170 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 DENND2CQ68D51 928 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 BRAT1Q6PJG6 821 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 Q6ZSR6 202 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 B4GALNT4Q76KP1 1039 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 DAAM2Q86T65 1068 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 TMEM145Q8NBT3 493 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 DESI2Q9BSY9 194 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 ATP8A1Q9Y2Q0 1164 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 ALG6Q9Y672 507 aa18.84■□□□□ 0.61
USP39-209ENST00000458268 PCNX2A6NKB5 2137 aa18.83■□□□□ 0.61
USP39-209ENST00000458268 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
USP39-209ENST00000458268 DFNA5O60443 496 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 PEX11BO96011 259 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 CPP00450 1065 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 NSUN2Q08J23 767 aaKnown RBP eCLIP18.83■□□□□ 0.6
USP39-209ENST00000458268 TIGD7Q6NT04 549 aaPredicted RBP18.83■□□□□ 0.6
USP39-209ENST00000458268 MFSD7Q6UXD7 560 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 IQCHQ86VS3 1027 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 FAF2Q96CS3 445 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 NSMCE3Q96MG7 304 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 NUDCD1Q96RS6 583 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 SEMA3CQ99985 751 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 C1QTNF2Q9BXJ5 285 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 CAAP1Q9H8G2 361 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 NOD2Q9HC29 1040 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 RBM22Q9NW64 420 aaKnown RBP eCLIP18.83■□□□□ 0.6
USP39-209ENST00000458268 DNAJC28Q9NX36 388 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 DTLQ9NZJ0 730 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 PCOLCE2Q9UKZ9 415 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 NCOR2Q9Y618 2525 aa18.83■□□□□ 0.6
USP39-209ENST00000458268 TSPAN11A1L157 253 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 RCCD1A6NED2 376 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 KRT10P13645 584 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 C6P13671 934 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 SPINK2P20155 84 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 MX2P20592 715 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 EPHA8P29322 1005 aaPredicted RBP18.82■□□□□ 0.6
USP39-209ENST00000458268 CDC25BP30305 580 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 GRK6P43250 576 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 MARCKSL1P49006 195 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 LIG3P49916 1009 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 DSC2Q02487 901 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 AP1B1Q10567 949 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 OVGP1Q12889 678 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 SLC10A2Q12908 348 aaPredicted RBP18.82■□□□□ 0.6
USP39-209ENST00000458268 INAVAQ3KP66 663 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 CCDC13Q8IYE1 715 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 OXR1Q8N573 874 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 EID2Q8N6I1 236 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 PNPLA1Q8N8W4 532 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 HAUS1Q96CS2 278 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 LGMNQ99538 433 aa18.82■□□□□ 0.6
USP39-209ENST00000458268 MGME1Q9BQP7 344 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms