RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TKTL2Q9H0I9 626 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 RAB6CQ9H0N0 254 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 KCNF1Q9H3M0 494 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SEMA6CQ9H3T2 930 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 GSX1Q9H4S2 264 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ACSS3Q9H6R3 686 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 WDCPQ9H6R7 721 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SYNCQ9H7C4 482 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 MPP6Q9NZW5 540 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ARHGAP20Q9P2F6 1191 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 APEX2Q9UBZ4 518 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 SCML1Q9UN30 329 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 PCDHGB2Q9Y5G2 931 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 ACTL7AQ9Y615 435 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 HS3ST4Q9Y661 456 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 CHD5Q8TDI0 1954 aa4.81□□□□□ -1.64
GTF3C3-208ENST00000455546 AKAP13Q12802 2813 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ITIH6Q6UXX5 1313 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 A0A1B0GVM2 712 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 TCAF2A6NFQ2 919 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 C10orf142B7Z368 130 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 MCF2LO15068 1137 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 HSF2BPO75031 334 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 LDOC1O95751 146 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 CTSLP07711 333 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC2A3P11169 496 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 SRCP12931 536 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 MYF5P13349 255 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 JUPP14923 745 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 PRLRP16471 622 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 RRM1P23921 792 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 GRK6P43250 576 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 SULT1E1P49888 294 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 CCT8P50990 548 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 CCR5P51681 352 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 TAS2R38P59533 333 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 SULT2A1Q06520 285 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 CDK5R2Q13319 367 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 SERINC3Q13530 473 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 RAPGEF1Q13905 1077 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 STAT4Q14765 748 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 DRAP1Q14919 205 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 NFKBIBQ15653 356 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF542PQ5EBM4 170 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 AGBL4Q5VU57 503 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 OTUD1Q5VV17 481 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 TRNP1Q6NT89 227 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 OLFML1Q6UWY5 402 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 C6orf15Q6UXA7 325 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 UNC5AQ6ZN44 842 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ENOSF1Q7L5Y1 443 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 TFAP2DQ7Z6R9 452 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 PRPF39Q86UA1 669 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 CD163Q86VB7 1156 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ERICH1Q86X53 443 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 MCATQ8IVS2 390 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 MRPL41Q8IXM3 137 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM71AQ8IYT1 594 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 SH2D3CQ8N5H7 860 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF557Q8N988 423 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ATP11CQ8NB49 1132 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 KDM1BQ8NB78 822 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 NETO2Q8NC67 525 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 CHST14Q8NCH0 376 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 OR7D4Q8NG98 312 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 CPA5Q8WXQ8 436 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 OR8D1Q8WZ84 308 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 LRIG1Q96JA1 1093 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 CNDP2Q96KP4 475 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 TBCBQ99426 244 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 NPY6RQ99463 290 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ELF4Q99607 663 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 MIPEPQ99797 713 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 TM9SF2Q99805 663 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 TRIM62Q9BVG3 475 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 PDCL3Q9H2J4 239 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 NDST4Q9H3R1 872 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 FZD3Q9NPG1 666 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 GDF3Q9NR23 364 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 SAMSN1Q9NSI8 373 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 PIGVQ9NUD9 493 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 FTSJ1Q9UET6 329 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC25A13Q9UJS0 675 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 VPS28Q9UK41 221 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 FZD4Q9ULV1 537 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 OR51B4Q9Y5P0 310 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 FHOD1Q9Y613 1164 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 WDFY3Q8IZQ1 3526 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ARHGEF17Q96PE2 2063 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ZFHX4Q86UP3 3567 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 ANKRD36A6QL64 1941 aa4.8□□□□□ -1.64
GTF3C3-208ENST00000455546 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 A0A1W2PQU0 124 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 GTPBP10A4D1E9 387 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 DRGXA6NNA5 263 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 GOLGA8SH3BPF8 625 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 KPNA3O00505 521 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 PES1O00541 588 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms