RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 GEMIN4P57678 1058 aaKnown RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 SESN2P58004 480 aaPredicted RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 SEMG2Q02383 582 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 PDIA2Q13087 525 aaKnown RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 MPP3Q13368 585 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 FZD5Q13467 585 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 ENPP2Q13822 863 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 PRPSAP1Q14558 356 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 EIF4HQ15056 248 aaKnown RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 UAP1Q16222 522 aaPredicted RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 POM121L1PQ3SYA9 428 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 BBS9Q3SYG4 887 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 SIRPB2Q5JXA9 342 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 KIAA1211LQ6NV74 962 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 LRRC8BQ6P9F7 803 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 STK40Q8N2I9 435 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 BBS5Q8N3I7 341 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 PCDH20Q8N6Y1 951 aaKnown RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 BBOF1Q8ND07 529 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 FAM3CQ92520 227 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 C9orf72Q96LT7 481 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 ASB2Q96Q27 587 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 FAM129BQ96TA1 746 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 TDRD1Q9BXT4 1180 aaKnown RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 CEP44Q9C0F1 390 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 SEMA4AQ9H3S1 761 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 C8orf33Q9H7E9 229 aaPredicted RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 SAYSD1Q9NPB0 183 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 AAR2Q9Y312 384 aaKnown RBP11.08□□□□□ -0.64
SCN9A-205ENST00000454569 STON1Q9Y6Q2 735 aa11.08□□□□□ -0.64
SCN9A-205ENST00000454569 CCDC78A2IDD5 438 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PLK4O00444 970 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 TIMM44O43615 452 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ZNF189O75820 626 aaPredicted RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 IGSF6O95976 241 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 GSRP00390 522 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 HNRNPLP14866 589 aaKnown RBP eCLIP11.07□□□□□ -0.641e-6■■□□□ 13.4
SCN9A-205ENST00000454569 HSPA9P38646 679 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ELK3P41970 407 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 SNRPD1P62314 119 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CAV1Q03135 178 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CDK18Q07002 472 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 SLC1A5Q15758 541 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 MLF2Q15773 248 aaPredicted RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 HNRNPA1L2Q32P51 320 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CCDC38Q502W7 563 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CES3Q6UWW8 571 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 SERPINA13PQ6UXR4 307 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 TMC3Q7Z5M5 1100 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ZNF513Q8N8E2 541 aaPredicted RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 EIF1ADQ8N9N8 165 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 IL17RCQ8NAC3 791 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 GRIN3AQ8TCU5 1115 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PDCD6IPQ8WUM4 868 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 HNRNPLLQ8WVV9 542 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PIH1D2Q8WWB5 315 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ZNF778Q96MU6 729 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 LRRC40Q9H9A6 602 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PRSS16Q9NQE7 514 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 C2orf42Q9NWW7 574 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 SYBUQ9NX95 663 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 MUTYHQ9UIF7 546 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 NDRG2Q9UN36 371 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 SORCS3Q9UPU3 1222 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PCDHB9Q9Y5E1 797 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 SPO11Q9Y5K1 396 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 TEX264Q9Y6I9 313 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 BDP1A6H8Y1 2624 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 TECTAO75443 2155 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 AURKAO14965 403 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ALOX15BO15296 676 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 HTRA2O43464 458 aaPredicted RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PPFIA2O75334 1257 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 LEFTY1O75610 366 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 UGT2B4P06133 528 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 EPHX1P07099 455 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ALPIP09923 528 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CTPS1P17812 591 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 MAGEA4P43358 317 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 GPX6P59796 221 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ST8SIA6P61647 398 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CDK16Q00536 496 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PFKPQ01813 784 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CCINQ13939 588 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PTPRCAPQ14761 206 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 HIF1AQ16665 826 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 KYNUQ16719 465 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 LRRC73Q5JTD7 316 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PPP1R21Q6ZMI0 780 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 Q6ZS52 159 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CAPN12Q6ZSI9 719 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 UNC5BQ8IZJ1 945 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 UHMK1Q8TAS1 419 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ATXN2LQ8WWM7 1075 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 FEM1CQ96JP0 617 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 KLHL32Q96NJ5 620 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 FSD1LQ9BXM9 530 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 SLC6A17Q9H1V8 727 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms