RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 TOR1BO14657 336 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 FFAR2O15552 330 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 SIGLEC6O43699 453 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 KRT37O76014 449 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 H2AFZP0C0S5 128 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 ITIH2P19823 946 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 HNF1BP35680 557 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 RGRP47804 291 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 SCNN1BP51168 640 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 CDH6P55285 790 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 PFN3P60673 137 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 AP1S1P61966 158 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 YPEL5P62699 121 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 POLR2LP62875 67 aaKnown RBP10.78□□□□□ -0.68
DDX39A-203ENST00000454233 SLC25A11Q02978 314 aaKnown RBP10.78□□□□□ -0.68
DDX39A-203ENST00000454233 NSUN2Q08J23 767 aaKnown RBP eCLIP10.78□□□□□ -0.68
DDX39A-203ENST00000454233 ZNF211Q13398 564 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-203ENST00000454233 ILKQ13418 452 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 PTK2BQ14289 1009 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 FZD2Q14332 565 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 LBRQ14739 615 aaKnown RBP10.78□□□□□ -0.68
DDX39A-203ENST00000454233 SMAD1Q15797 465 aaKnown RBP10.78□□□□□ -0.68
DDX39A-203ENST00000454233 SLC18A3Q16572 532 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 ZNF542PQ5EBM4 170 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 ARHGAP36Q6ZRI8 547 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 H2AFVQ71UI9 128 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 TMPRSS12Q86WS5 348 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 SLC25A45Q8N413 288 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 ATPAF2Q8N5M1 289 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 OR4C6Q8NH72 309 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 TSC1Q92574 1164 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 CENPTQ96BT3 561 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 PSKH2Q96QS6 385 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 CCDC86Q9H6F5 360 aaKnown RBP10.78□□□□□ -0.68
DDX39A-203ENST00000454233 PCDH18Q9HCL0 1135 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 PCDH12Q9NPG4 1184 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 GPR27Q9NS67 375 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 EVA1BQ9NVM1 165 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 UCKL1Q9NWZ5 548 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 RCOR3Q9P2K3 495 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-203ENST00000454233 UVRAGQ9P2Y5 699 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 ATP8A1Q9Y2Q0 1164 aa10.78□□□□□ -0.68
DDX39A-203ENST00000454233 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 SSU72P8A0A1W2PR75 194 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 TRIM38O00635 465 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 SCAMP1O15126 338 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 AKR1B10O60218 316 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 LZTS3O60299 673 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 BUB1BO60566 1050 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 CSF2P04141 144 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 JUPP14923 745 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 NME1P15531 152 aaKnown RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 JUNDP17535 347 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 IGFALSP35858 605 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 GJC1P36383 396 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 HSPA9P38646 679 aaKnown RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 LRRC14Q15048 493 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 PROX2Q3B8N5 592 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 TXNRD3NBQ6F5E7 133 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 LRRC49Q8IUZ0 686 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 VSTM4Q8IW00 320 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 TP53INP2Q8IXH6 220 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 RNF214Q8ND24 703 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 BTN2A2Q8WVV5 523 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 DNAJC7Q99615 494 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 DUSP23Q9BVJ7 150 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 ETNK2Q9NVF9 386 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 NLGN3Q9NZ94 848 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 NENFQ9UMX5 172 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 COQ6Q9Y2Z9 468 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 USP24Q9UPU5 2620 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 PTPRBP23467 1997 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 GOLGA4Q13439 2230 aaKnown RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 ARID1BQ8NFD5 2236 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 IGF2RP11717 2491 aa10.77□□□□□ -0.69
DDX39A-203ENST00000454233 TDRD6O60522 2096 aaKnown RBP10.77□□□□□ -0.69
DDX39A-203ENST00000454233 A0A1W2PQ67 120 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 FAM149AA5PLN7 773 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 TMEM110-MUSTN1A8MSY1 372 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 AQP9O43315 295 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 MAFKO60675 156 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 PROSCO94903 275 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 TMEM253P0C7T8 217 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 C6P13671 934 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 ACP1P24666 158 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 NFKBIAP25963 317 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 MMP12P39900 470 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 LIG3P49916 1009 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 DUSP3P51452 185 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-203ENST00000454233 E2F1Q01094 437 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 SLC10A7Q0GE19 358 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 IRF4Q15306 451 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 ZFYVE27Q5T4F4 411 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 MARC1Q5VT66 337 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 MAP7D3Q8IWC1 876 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 PDCD7Q8N8D1 485 aaKnown RBP10.76□□□□□ -0.69
DDX39A-203ENST00000454233 TP53I13Q8NBR0 393 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-203ENST00000454233 KCTD6Q8NC69 237 aa10.76□□□□□ -0.69
DDX39A-203ENST00000454233 ZNF548Q8NEK5 533 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms