RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 RBMXL2O75526 392 aaKnown RBP4.63□□□□□ -1.67
LINC00393-202ENST00000452852 HNRNPCP07910 306 aaKnown RBP eCLIP4.63□□□□□ -1.67
LINC00393-202ENST00000452852 LAMP2P13473 410 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 CYP2C18P33260 490 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 NF2P35240 595 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 PCP4P48539 62 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 MMP14P50281 582 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 DGKQP52824 942 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 IFI35P80217 286 aaPredicted RBP4.63□□□□□ -1.67
LINC00393-202ENST00000452852 MC1RQ01726 317 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 CREB5Q02930 508 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 TBL3Q12788 808 aaKnown RBP4.63□□□□□ -1.67
LINC00393-202ENST00000452852 NAA35Q5VZE5 725 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
LINC00393-202ENST00000452852 KLHL24Q6TFL4 600 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 IKBIPQ70UQ0 350 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 RAB11FIP4Q86YS3 637 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 ADSSL1Q8N142 457 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 XAGE5Q8WWM1 108 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 KCNJ9Q92806 393 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 VOPP1Q96AW1 172 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 CDCA5Q96FF9 252 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 TRMT61AQ96FX7 289 aaKnown RBP4.63□□□□□ -1.67
LINC00393-202ENST00000452852 FAR2Q96K12 515 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 ANKRD2Q9GZV1 360 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 ZCCHC17Q9NP64 241 aaKnown RBP4.63□□□□□ -1.67
LINC00393-202ENST00000452852 KCNK9Q9NPC2 374 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 MYOZ2Q9NPC6 264 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 THAP1Q9NVV9 213 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 ALKBH4Q9NXW9 302 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 DLL3Q9NYJ7 618 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 SLC25A10Q9UBX3 287 aaPredicted RBP4.63□□□□□ -1.67
LINC00393-202ENST00000452852 SH2B3Q9UQQ2 575 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 AOX1Q06278 1338 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 IL16Q14005 1332 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 ARAP2Q8WZ64 1704 aa4.63□□□□□ -1.67
LINC00393-202ENST00000452852 TNRC18O15417 2968 aaPredicted RBP4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ONECUT2O95948 504 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 URODP06132 367 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 IGKV5-2P06315 115 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 SPARCP09486 303 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ENGP17813 658 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 NFKBIAP25963 317 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 AVPR2P30518 371 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ICAM3P32942 547 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 PDE1AP54750 535 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 NLRP5P59047 1200 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 TAS2R50P59544 299 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 FKBP1BP68106 108 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ZBED6P86452 979 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 CDK18Q07002 472 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 THOC5Q13769 683 aaKnown RBP4.62□□□□□ -1.67
LINC00393-202ENST00000452852 GCKRQ14397 625 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 BECN1Q14457 450 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 RUNDC3AQ59EK9 446 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ZNF766Q5HY98 468 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 FCRLBQ6BAA4 426 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 MON1AQ86VX9 555 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 APOBEC3FQ8IUX4 373 aaKnown RBP4.62□□□□□ -1.67
LINC00393-202ENST00000452852 RFWD2Q8NHY2 731 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ETNPPLQ8TBG4 499 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ZCCHC10Q8TBK6 192 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 SOCS4Q8WXH5 440 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 DNAAF4Q8WXU2 420 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 PERPQ96FX8 193 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 VPS50Q96JG6 964 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ZMAT2Q96NC0 199 aaKnown RBP4.62□□□□□ -1.67
LINC00393-202ENST00000452852 YME1L1Q96TA2 773 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ELOVL1Q9BW60 279 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 COA1Q9GZY4 146 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ALDH8A1Q9H2A2 487 aaPredicted RBP4.62□□□□□ -1.67
LINC00393-202ENST00000452852 SYNCQ9H7C4 482 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 DUSP22Q9NRW4 184 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 GIMAP2Q9UG22 337 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 SARDHQ9UL12 918 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 SUFUQ9UMX1 484 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 ZNF804BA4D1E1 1349 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 FANCIQ9NVI1 1328 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 KDM3AQ9Y4C1 1321 aa4.62□□□□□ -1.67
LINC00393-202ENST00000452852 LAMB1P07942 1786 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 MANSC4A6NHS7 340 aaPredicted RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 AP4M1O00189 453 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 QSOX1O00391 747 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ZNF213O14771 459 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 VILLO15195 856 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 TNFSF14O43557 240 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 PMPCBO75439 489 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 KAT7O95251 611 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CYP3A4P08684 503 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CLTBP09497 229 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 GLULP15104 373 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ARSAP15289 507 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CREB1P16220 341 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 MMP8P22894 467 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 GKP32189 559 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ACSL1P33121 698 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 SNX16P57768 344 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 EEFSECP57772 596 aaKnown RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CHAF1BQ13112 559 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CBFBQ13951 182 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms