RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SFMBT1Q9UHJ3 866 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 PCDHGA9Q9Y5G4 932 aaKnown RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 CROCCQ5TZA2 2017 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 POLEQ07864 2286 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 DIDO1Q9BTC0 2240 aaKnown RBP8.01□□□□□ -1.13
LINC01961-201ENST00000449954 IGHV5-10-1A0A0J9YXX1 117 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 GOLGA6L7A0A1B0GV03 622 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 ANKUB1A6NFN9 424 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 MSI1O43347 362 aaKnown RBP8.01□□□□□ -1.13
LINC01961-201ENST00000449954 PRNPP04156 253 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 CTSEP14091 401 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 STAT5AP42229 794 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 NEK3P51956 506 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 HK3P52790 923 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 AP3M2P53677 418 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 SLC8A3P57103 927 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 CYP24A1Q07973 514 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 INCA1Q0VD86 236 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 BIRC3Q13489 604 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 ME3Q16798 604 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 EDRF1Q3B7T1 1238 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 MS4A13Q5J8X5 152 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 STXBP4Q6ZWJ1 553 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 BTLAQ7Z6A9 289 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 HPS6Q86YV9 775 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 UNC5BQ8IZJ1 945 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 CCDC127Q96BQ5 260 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 CCDC74BQ96LY2 380 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 PPP1R9BQ96SB3 815 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 NT5C1AQ9BXI3 368 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 EDEM3Q9BZQ6 932 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 SPRY4Q9C004 299 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 RDH14Q9HBH5 336 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 ABCC13Q9NSE7 274 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 RRN3Q9NYV6 651 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 TBC1D7Q9P0N9 293 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 LRIT1Q9P2V4 623 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 PNMA8BQ9ULN7 279 aaPredicted RBP8.01□□□□□ -1.13
LINC01961-201ENST00000449954 PCDHGB7Q9Y5F8 929 aa8.01□□□□□ -1.13
LINC01961-201ENST00000449954 AP1G1O43747 822 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 DPM1O60762 260 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 RASGRP1O95267 797 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 NADKO95544 446 aaPredicted RBP8□□□□□ -1.13
LINC01961-201ENST00000449954 RECKO95980 971 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 CTSLP07711 333 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 CAPN3P20807 821 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 CHRNA3P32297 505 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 TKTL1P51854 596 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 PLK1P53350 603 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 MAP7Q14244 749 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 DLG2Q15700 870 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 C14orf28Q4W4Y0 310 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 RILPL1Q5EBL4 403 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 PAPD7Q5XG87 772 aaKnown RBP8□□□□□ -1.13
LINC01961-201ENST00000449954 NADSYN1Q6IA69 706 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 JMJD6Q6NYC1 403 aaPredicted RBP8□□□□□ -1.13
LINC01961-201ENST00000449954 MSANTD2Q6P1R3 559 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 BHLHA9Q7RTU4 235 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 CDH24Q86UP0 819 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 NRSN1Q8IZ57 195 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 ESX1Q8N693 406 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 OR4D9Q8NGE8 314 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 TAF4BQ92750 862 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 RTP4Q96DX8 246 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 DPYSL5Q9BPU6 564 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 SPOCK3Q9BQ16 436 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 NUDT22Q9BRQ3 303 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 SLC25A23Q9BV35 468 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 MRPL40Q9NQ50 206 aaKnown RBP8□□□□□ -1.13
LINC01961-201ENST00000449954 NOP53Q9NZM5 478 aaKnown RBP8□□□□□ -1.13
LINC01961-201ENST00000449954 ZNF451Q9Y4E5 1061 aa8□□□□□ -1.13
LINC01961-201ENST00000449954 TMEM184BQ9Y519 407 aaPredicted RBP8□□□□□ -1.13
LINC01961-201ENST00000449954 KLF2Q9Y5W3 355 aaPredicted RBP8□□□□□ -1.13
LINC01961-201ENST00000449954 ZNF469Q96JG9 3925 aaPredicted RBP7.99□□□□□ -1.13
LINC01961-201ENST00000449954 PPP6R2O75170 966 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 ADRB3P13945 408 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 ASPAP45381 313 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 LIMK2P53671 638 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 B4GALNT1Q00973 533 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 HLTFQ14527 1009 aaKnown RBP eCLIP7.99□□□□□ -1.13
LINC01961-201ENST00000449954 SGSM1Q2NKQ1 1148 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 BSPRYQ5W0U4 402 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 ANKS6Q68DC2 871 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 OGFOD3Q6PK18 319 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 CEACAM20Q6UY09 585 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 PIGZQ86VD9 579 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 FAM129CQ86XR2 697 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 XYLT1Q86Y38 959 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 IQCKQ8N0W5 287 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 CFAP52Q8N1V2 620 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 SH2D3CQ8N5H7 860 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 Q8NA96 180 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 EDEM1Q92611 657 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 PNPLA2Q96AD5 504 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 IPO9Q96P70 1041 aaKnown RBP7.99□□□□□ -1.13
LINC01961-201ENST00000449954 C1QTNF7Q9BXJ2 289 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 ULBP1Q9BZM6 244 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 MLXIPLQ9NP71 852 aa7.99□□□□□ -1.13
LINC01961-201ENST00000449954 RCOR3Q9P2K3 495 aaPredicted RBP7.99□□□□□ -1.13
LINC01961-201ENST00000449954 FADS3Q9Y5Q0 445 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms