RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ACP1P24666 158 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 CSNK1DP48730 415 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 RENBPP51606 427 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 PFN3P60673 137 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 BCL2L1Q07817 233 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 DPYSQ14117 519 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 TMEM52BQ4KMG9 183 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 TMCO3Q6UWJ1 677 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 ARHGAP36Q6ZRI8 547 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 PROSER1Q86XN7 944 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 CAMK1DQ8IU85 385 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 PDCD7Q8N8D1 485 aaKnown RBP15.42■□□□□ 0.06
CHD3-205ENST00000449744 MDM1Q8TC05 714 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 CENPTQ96BT3 561 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 BTBD6Q96KE9 485 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 DUSP23Q9BVJ7 150 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 XPO4Q9C0E2 1151 aaKnown RBP15.42■□□□□ 0.06
CHD3-205ENST00000449744 EVA1BQ9NVM1 165 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 NLGN3Q9NZ94 848 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 SEPT3Q9UH03 358 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 TSPAN11A1L157 253 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 TOR1BO14657 336 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 SCAMP1O15126 338 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 CYP1A2P05177 515 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 TCF4P15884 667 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 JUNDP17535 347 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 IGFALSP35858 605 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 RGRP47804 291 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 SCNN1BP51168 640 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 YPEL5P62699 121 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 E2F1Q01094 437 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 NSUN2Q08J23 767 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHD3-205ENST00000449744 KRT81Q14533 505 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 ZNF235Q14590 738 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 LBRQ14739 615 aaKnown RBP15.41■□□□□ 0.06
CHD3-205ENST00000449744 HADHQ16836 314 aaKnown RBP15.41■□□□□ 0.06
CHD3-205ENST00000449744 HES3Q5TGS1 186 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 TMCO4Q5TGY1 634 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 POLNQ7Z5Q5 900 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 BBS5Q8N3I7 341 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 NIPA2Q8N8Q9 360 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 NSMCE1Q8WV22 266 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 BTN2A2Q8WVV5 523 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 TEKT4Q8WW24 435 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 ZNF599Q96NL3 588 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 CSPG4P5Q96PW8 444 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 PCDH12Q9NPG4 1184 aa15.41■□□□□ 0.06
CHD3-205ENST00000449744 TDRD6O60522 2096 aaKnown RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 TAF4O00268 1085 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 RIOK3O14730 519 aaKnown RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 LZTS3O60299 673 aaPredicted RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 BUB1BO60566 1050 aaPredicted RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 CAPNS1P04632 268 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 SERPINB6P35237 376 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 DUSP3P51452 185 aaPredicted RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 CLDN6P56747 220 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 POLR2LP62875 67 aaKnown RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 LRRC14Q15048 493 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 TSR1Q2NL82 804 aaKnown RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 TXNRD3NBQ6F5E7 133 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 KDM7AQ6ZMT4 941 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 TP53I13Q8NBR0 393 aaPredicted RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 ZNF548Q8NEK5 533 aaPredicted RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 LMX1AQ8TE12 382 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 DEF6Q9H4E7 631 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 CAAP1Q9H8G2 361 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 PCDH18Q9HCL0 1135 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 MBNL1Q9NR56 388 aaKnown RBP15.4■□□□□ 0.06
CHD3-205ENST00000449744 CTTNBP2NLQ9P2B4 639 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 SPASTQ9UBP0 616 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 ATP8A1Q9Y2Q0 1164 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 COQ6Q9Y2Z9 468 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 CSNK1G3Q9Y6M4 447 aa15.4■□□□□ 0.06
CHD3-205ENST00000449744 K7ESM1 405 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 AQP9O43315 295 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 NEBLO76041 1014 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 PRKCGP05129 697 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 TPM1P09493 284 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 GIMD1P0DJR0 217 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 CKMT1AP12532 417 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 C6P13671 934 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 HSPA9P38646 679 aaKnown RBP15.39■□□□□ 0.05
CHD3-205ENST00000449744 EIF4A3P38919 411 aaKnown RBP15.39■□□□□ 0.05
CHD3-205ENST00000449744 LIG3P49916 1009 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 CDH6P55285 790 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 AP1S1P61966 158 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 SLC25A11Q02978 314 aaKnown RBP15.39■□□□□ 0.05
CHD3-205ENST00000449744 CYP4F3Q08477 520 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 SLC10A7Q0GE19 358 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 EIF2B5Q13144 721 aaKnown RBP15.39■□□□□ 0.05
CHD3-205ENST00000449744 TARDBPQ13148 414 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHD3-205ENST00000449744 CAMK2BQ13554 666 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 TRIM14Q14142 442 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 IRF4Q15306 451 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 TPRG1LQ5T0D9 272 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 SPECC1LQ69YQ0 1117 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 TP53INP2Q8IXH6 220 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 ATPAF2Q8N5M1 289 aa15.39■□□□□ 0.05
CHD3-205ENST00000449744 ZNF564Q8TBZ8 553 aaPredicted RBP15.39■□□□□ 0.05
CHD3-205ENST00000449744 CTNNBL1Q8WYA6 563 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms