RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 POF1BQ8WVV4 589 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC44A1Q8WWI5 657 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PRPF31Q8WWY3 499 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 HSPH1Q92598 858 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 NKD2Q969F2 451 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TRIM63Q969Q1 353 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TAMM41Q96BW9 452 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CDCA5Q96FF9 252 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 DYDC2Q96IM9 177 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 HRASLS5Q96KN8 279 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TOX2Q96NM4 488 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ASB2Q96Q27 587 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 RMDN3Q96TC7 470 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CGRRF1Q99675 332 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 FOXB1Q99853 325 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PRMT1Q99873 361 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 WACQ9BTA9 647 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TRAF4Q9BUZ4 470 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 NUP85Q9BW27 656 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ACE2Q9BYF1 805 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PITHD1Q9GZP4 211 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 INTS2Q9H0H0 1204 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TP63Q9H3D4 680 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 HIPK3Q9H422 1215 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ARMC7Q9H6L4 198 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ACAD9Q9H845 621 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 WDR6Q9NNW5 1121 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TRMT13Q9NUP7 481 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 FGFR1OP2Q9NVK5 253 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 STMN3Q9NZ72 180 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 NPAP1Q9NZP6 1156 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TMEM9Q9P0T7 183 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF69Q9UC07 566 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 LGALS13Q9UHV8 139 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PRSS50Q9UI38 385 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 VPS51Q9UID3 782 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 GMEB2Q9UKD1 530 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CPSF3Q9UKF6 684 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 VAV3Q9UKW4 847 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ARHGAP26Q9UNA1 814 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TMEM5Q9Y2B1 443 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ACOT9Q9Y305 439 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF175Q9Y473 711 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC4A4Q9Y6R1 1079 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 MAU2Q9Y6X3 613 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 FLT1P17948 1338 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ADGRA3Q8IWK6 1321 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 NWD2Q9ULI1 1742 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 METP08581 1390 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 TAF1P21675 1872 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 LAMB4A4D0S4 1761 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 RGPD8O14715 1765 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 RGPD5Q99666 1765 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 CYP2D7A0A087X1C5 515 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 A0A0A6YYJ9 748 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 PRAMEF22A3QJZ6 481 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCDC160A6NGH7 325 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 KLRF2D3W0D1 207 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLCO1B7G3V0H7 640 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 PI4K2BG5E9Z4 385 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 KPNA5O15131 536 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC22A2O15244 555 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 GATCO43716 136 aaKnown RBP3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 KLHL41O60662 606 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 PTP4A3O75365 173 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 CSPG5O95196 566 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 APOL3O95236 402 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 MPIG6BO95866 241 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 GOT2P00505 430 aaKnown RBP3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 CELA3BP08861 270 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 TFPTP0C1Z6 253 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT3P12035 628 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 SELLP14151 372 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 RAC2P15153 192 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 FAHP16930 419 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 DCKP27707 260 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 AOAHP28039 575 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 PEX2P28328 305 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 HTR7P34969 479 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 RFC1P35251 1148 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 HNF1BP35680 557 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 GP5P40197 560 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 HADHAP40939 763 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 MTHFSP49914 203 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 COPB1P53618 953 aaKnown RBP3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 PRAMEP78395 509 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC6A3Q01959 620 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 RHAGQ02094 409 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 KDSRQ06136 332 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 RIPPLY1Q0D2K3 151 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 MALLQ13021 153 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 STX3Q13277 289 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 PPP2R5CQ13362 524 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 SNTA1Q13424 505 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 PNOCQ13519 176 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 RIN1Q13671 783 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 RFTN1Q14699 578 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 KIR3DS1Q14943 382 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 PSMD6Q15008 389 aa3.67□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT31Q15323 416 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms