RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PCDHB4Q9Y5E5 795 aa7.18□□□□□ -1.26
LRRC28-203ENST00000447360 HS3ST4Q9Y661 456 aa7.18□□□□□ -1.26
LRRC28-203ENST00000447360 A0A0D9SEW6 157 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 CXorf51AA0A1B0GTR3 108 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 AGRPO00253 132 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 AREL1O15033 823 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 NKX2-8O15522 239 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ZW10O43264 779 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 TM7SF2O76062 418 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ENDOD1O94919 500 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 DDAH2O95865 285 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 GLI1P08151 1106 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 NUDT7P0C024 238 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 EPB41P11171 864 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 POU3F2P20265 443 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 BRD2P25440 801 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 TNFRSF8P28908 595 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 PRCPP42785 496 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 SERPINH1P50454 418 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 SRP54P61011 504 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 PITX1P78337 314 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 B4GALNT1Q00973 533 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 MC1RQ01726 317 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 CDC20Q12834 499 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 TRA2AQ13595 282 aaKnown RBP eCLIP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 HLTFQ14527 1009 aaKnown RBP eCLIP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ALG11Q2TAA5 492 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 MAP9Q49MG5 647 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 C14orf28Q4W4Y0 310 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 COBLL1Q53SF7 1204 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ZNF805Q5CZA5 627 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ACBD5Q5T8D3 534 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 TCTN3Q6NUS6 607 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ZNF783Q6ZMS7 281 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 VPS36Q86VN1 386 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 HEATR4Q86WZ0 1026 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ELOA2Q8IYF1 753 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 TP53I13Q8NBR0 393 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ATL2Q8NHH9 583 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 PRR7Q8TB68 274 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 TSACCQ96A04 125 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 CCDC47Q96A33 483 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 KIAA1143Q96AT1 154 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ISG20Q96AZ6 181 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 GSDMAQ96QA5 445 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 FAM204AQ9H8W3 233 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 PRDM8Q9NQV8 689 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 MBNL1Q9NR56 388 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 GGT7Q9UJ14 662 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 PCDHGC3Q9UN70 934 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ITM2BQ9Y287 266 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 DGKBQ9Y6T7 804 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 CACNA1DQ01668 2161 aa7.17□□□□□ -1.26
LRRC28-203ENST00000447360 NYNRINQ9P2P1 1898 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 ZFC3H1O60293 1989 aaKnown RBP7.17□□□□□ -1.26
LRRC28-203ENST00000447360 UNC13CQ8NB66 2214 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ADGRG4Q8IZF6 3080 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 SYNJ2BP-COX16A0A087WUM0 186 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 IGHV5-10-1A0A0J9YXX1 117 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ILVBLA1L0T0 632 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 GOLGA6L4A6NEF3 574 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 DRGXA6NNA5 263 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 EFCAB7A8K855 629 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 E5RJQ4 531 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 CETN3O15182 167 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 RAD1O60671 282 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 MMP20O60882 483 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 SEMA7AO75326 666 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 PAGE1O75459 146 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ZMPSTE24O75844 475 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ADCY5O95622 1261 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 TNFP01375 233 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 PRKCGP05129 697 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 PRKAR1AP10644 381 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 BMP6P22004 513 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 GNLYP22749 145 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 MAP4P27816 1152 aaKnown RBP7.16□□□□□ -1.26
LRRC28-203ENST00000447360 OR1E1P30953 314 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 UQCRFS1P47985 274 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 DNA2P51530 1060 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 PMS1P54277 932 aaKnown RBP7.16□□□□□ -1.26
LRRC28-203ENST00000447360 RAB15P59190 212 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 LRMPQ12912 555 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 NFATC4Q14934 902 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 LRRC14Q15048 493 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 TAF5Q15542 800 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 KLHL40Q2TBA0 621 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 DEFB109BQ30KR1 87 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ALFQ53S48 1182 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 DCAF17Q5H9S7 520 aaPredicted RBP7.16□□□□□ -1.26
LRRC28-203ENST00000447360 DCAF12Q5T6F0 453 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ZNF658Q5TYW1 1059 aaPredicted RBP7.16□□□□□ -1.26
LRRC28-203ENST00000447360 TCERG1LQ5VWI1 586 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ANKRD40Q6AI12 368 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ZNF787Q6DD87 383 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 ENPP7Q6UWV6 458 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 MAMDC2Q7Z304 686 aaPredicted RBP7.16□□□□□ -1.26
LRRC28-203ENST00000447360 RD3Q7Z3Z2 195 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 TTC7BQ86TV6 843 aa7.16□□□□□ -1.26
LRRC28-203ENST00000447360 AGBL5Q8NDL9 886 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms