RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	HNRNPD	Q14103	355 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	CLPP	Q16740	277 aa	Predicted RBP	12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	CCDC153	Q494R4	210 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	SCAMP5	Q8TAC9	235 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	BHMT	Q93088	406 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	PABPC5	Q96DU9	382 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	FSD1L	Q9BXM9	530 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	PAIP1	Q9H074	479 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	ASB7	Q9H672	318 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	RAP2C	Q9Y3L5	183 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	XIRP2	A4UGR9	3374 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312		H3BMM5	538 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	MRAS	O14807	208 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	LRIG2	O94898	1065 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	TNFAIP8	O95379	198 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	S100A1	P23297	94 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	GLDC	P23378	1020 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	LRPAP1	P30533	357 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	PIGF	Q07326	219 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	GRIK4	Q16099	956 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	LIPM	Q5VYY2	423 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	USP34	Q70CQ2	3546 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	FASTKD5	Q7L8L6	764 aa	Known RBP	12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	VPS33A	Q96AX1	596 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	SMIM14	Q96QK8	99 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	CEP44	Q9C0F1	390 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	SLC7A5P2	Q9GIP4	190 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	OSBPL2	Q9H1P3	480 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	RBPJL	Q9UBG7	517 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	TIMM22	Q9Y584	194 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	FADS3	Q9Y5Q0	445 aa		12.64	□□□□□ -0.39
DDR1-238	ENST00000446312	GIPC1	O14908	333 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	DDHD2	O94830	711 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	KCNH1	O95259	989 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	BDNF	P23560	247 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	ADRA1B	P35368	520 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	GGT5	P36269	586 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	SLC1A2	P43004	574 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	SLC5A3	P53794	718 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	LRP8	Q14114	963 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	OTUD1	Q5VV17	481 aa	Predicted RBP	12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	POTEA	Q6S8J7	498 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	TIFAB	Q6ZNK6	161 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	SLC26A9	Q7LBE3	791 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	ZC3HC1	Q86WB0	502 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	CNTD1	Q8N815	330 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	B3GALNT2	Q8NCR0	500 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	ARRDC4	Q8NCT1	418 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	NSUN5	Q96P11	429 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	WDCP	Q9H6R7	721 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	EXD2	Q9NVH0	621 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	NCKIPSD	Q9NZQ3	722 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	ADAMTS5	Q9UNA0	930 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	MAGED1	Q9Y5V3	778 aa	Predicted RBP	12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	IGKV6-21	A0A0C4DH24	114 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	SMIM28	A0A1B0GU29	152 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	ERI2	A8K979	691 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	UBD	O15205	165 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	BAIAP3	O94812	1187 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	STMN1	P16949	149 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	INCA1	Q0VD86	236 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	RPS6KA2	Q15349	733 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	PUS10	Q3MIT2	529 aa	Known RBP	12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	KIAA0319	Q5VV43	1072 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	OGFOD2	Q6N063	350 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	OR10Q1	Q8NGQ4	319 aa		12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	FRMD8	Q9BZ67	464 aa	Predicted RBP	12.63	□□□□□ -0.39
DDR1-238	ENST00000446312	PSMD12	O00232	456 aa	Predicted RBP	12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	INPP4B	O15327	924 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	ALDH1A2	O94788	518 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	ZBTB11	O95625	1053 aa	Predicted RBP	12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	ATIC	P31939	592 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	KCNC1	P48547	511 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	NR2C2	P49116	596 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	PGF	P49763	221 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	BEX3	Q00994	111 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	SLC25A52	Q3SY17	297 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	GPR158	Q5T848	1215 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	RAVER1	Q8IY67	606 aa	Known RBP	12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	ANKRD49	Q8WVL7	239 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	C3orf30	Q96M34	536 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	HEPH	Q9BQS7	1158 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	C1orf50	Q9BV19	199 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	VPS33B	Q9H267	617 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312		F8W810	466 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	SDHD	O14521	159 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	LINC00032	P0C843	101 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	HOXA11	P31270	313 aa	Predicted RBP	12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	PCYT1A	P49585	367 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	OAZ1	P54368	228 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	CARTPT	Q16568	116 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	PKDCC	Q504Y2	493 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	SPANXN3	Q5MJ09	141 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	TSTD2	Q5T7W7	516 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	FAM91A1	Q658Y4	838 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	TTC33	Q6PID6	262 aa	Predicted RBP	12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	RIOX2	Q8IUF8	465 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	SCAI	Q8N9R8	606 aa		12.62	□□□□□ -0.39
DDR1-238	ENST00000446312	SGCD	Q92629	289 aa		12.62	□□□□□ -0.39

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