RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PAIP1Q9H074 479 aaKnown RBP16.76■□□□□ 0.27
TCOF1-206ENST00000445265 LIMD1Q9UGP4 676 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 FGF1P05230 155 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 WARSP23381 471 aaKnown RBP16.75■□□□□ 0.27
TCOF1-206ENST00000445265 PRAMEF19Q5SWL8 479 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 CWF19L1Q69YN2 538 aaKnown RBP16.75■□□□□ 0.27
TCOF1-206ENST00000445265 GK5Q6ZS86 529 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 SH3KBP1Q96B97 665 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 SKA1Q96BD8 255 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 TEKT5Q96M29 485 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 DMTF1Q9Y222 760 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 KATNA1O75449 491 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 IDO1P14902 403 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 TSPAN8P19075 237 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 HLA-DPA1P20036 260 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 LMO2P25791 158 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 NEK2P51955 445 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 DAOAP59103 153 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 RAP1GAP2Q684P5 730 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 RETSATQ6NUM9 610 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 IGDCC3Q8IVU1 814 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 HS6ST3Q8IZP7 471 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 TMCO5AQ8N6Q1 288 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 SLC35F5Q8WV83 523 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 SIGLEC10Q96LC7 697 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 ZNF487B1APH4 448 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 SNAP91O60641 907 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 MBL2P11226 248 aaPredicted RBP16.75■□□□□ 0.27
TCOF1-206ENST00000445265 ETS2P15036 469 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 TNK2Q07912 1038 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 ANO7Q6IWH7 933 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 NTAN1Q96AB6 310 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 GNEQ9Y223 722 aaKnown RBP16.75■□□□□ 0.27
TCOF1-206ENST00000445265 BUD23O43709 281 aaKnown RBP16.75■□□□□ 0.27
TCOF1-206ENST00000445265 ENDOD1O94919 500 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 MAXP61244 160 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 HERC6Q8IVU3 1022 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 WDR60Q8WVS4 1066 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 PTPRHQ9HD43 1115 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 SIRPGQ9P1W8 387 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 UXTQ9UBK9 157 aaPredicted RBP16.75■□□□□ 0.27
TCOF1-206ENST00000445265 FBXW11Q9UKB1 542 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 TCAF1Q9Y4C2 921 aa16.75■□□□□ 0.27
TCOF1-206ENST00000445265 UPP2O95045 317 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 OAS1P00973 400 aaKnown RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 TMED10P49755 219 aaKnown RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 ACBD5Q5T8D3 534 aaPredicted RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 ELMSAN1Q6PJG2 1045 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 AFTPHQ6ULP2 937 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 IL27RAQ6UWB1 636 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 FSTL5Q8N475 847 aaPredicted RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 DQX1Q8TE96 717 aaKnown RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 UCMAQ8WVF2 138 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 LPPQ93052 612 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 PEBP4Q96S96 227 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 AGAP2Q99490 1192 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 GORASP1Q9BQQ3 440 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 CLK4Q9HAZ1 481 aaKnown RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 MYO5AQ9Y4I1 1855 aaKnown RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 A0A0G2JLL6 359 aaPredicted RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 ZNF682O95780 498 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 NMBRP28336 390 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 SERPINB1P30740 379 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 PRRT2Q7Z6L0 340 aaPredicted RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 MON1AQ86VX9 555 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 WDTC1Q8N5D0 677 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 AADATQ8N5Z0 425 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 PQLC3Q8N755 202 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 MAGEE2Q8TD90 523 aaPredicted RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 RSL24D1Q9UHA3 163 aaKnown RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 A0A1B0GUL6 1792 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 RGS14O43566 566 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 CDH13P55290 713 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 PRKG2Q13237 762 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 ABRAXAS1Q6UWZ7 409 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 DNAJB14Q8TBM8 379 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 BHMTQ93088 406 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 UNC93B1Q9H1C4 597 aa16.74■□□□□ 0.27
TCOF1-206ENST00000445265 TRIM45Q9H8W5 580 aaPredicted RBP16.74■□□□□ 0.27
TCOF1-206ENST00000445265 MAP3K13O43283 966 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 NPHS1O60500 1241 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 ARIH2O95376 493 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 GUCA1CO95843 209 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 FESP07332 822 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 MAP2K5Q13163 448 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 DDX39BQ13838 428 aaKnown RBP16.73■□□□□ 0.27
TCOF1-206ENST00000445265 PPP1R15BQ5SWA1 713 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 ASRGL1Q7L266 308 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 AZIN2Q96A70 460 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 RHOBTB2Q9BYZ6 727 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 MPP6Q9NZW5 540 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 SFMBT1Q9UHJ3 866 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 TTPAP49638 278 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 DEFA1P59665 94 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 DEFA3P59666 94 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 HECTD2Q5U5R9 776 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 TTC23Q5W5X9 447 aa16.73■□□□□ 0.27
TCOF1-206ENST00000445265 TXNDC11Q6PKC3 985 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms