RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 VPS36Q86VN1 386 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 PHACTR4Q8IZ21 702 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 TP53I13Q8NBR0 393 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 SCG3Q8WXD2 468 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 SYT11Q9BT88 431 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 PDFQ9HBH1 243 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 LHX3Q9UBR4 397 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 KLF15Q9UIH9 416 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 GGT7Q9UJ14 662 aa16.49■□□□□ 0.23
CTDSP1-204ENST00000443891 TEX51A0A1B0GUA7 166 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 PRAMEF11O60813 436 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 CSO75390 466 aaKnown RBP16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 RNF8O76064 485 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 ALPIP09923 528 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 HTR1BP28222 390 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 EIF4A3P38919 411 aaKnown RBP16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 HCAR3P49019 387 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 NSUN2Q08J23 767 aaKnown RBP eCLIP16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 MAMLD1Q13495 774 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 ELOCQ15369 112 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 KLHL40Q2TBA0 621 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 PRRT3Q5FWE3 981 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 CFAP58Q5T655 872 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 ERMARDQ5T6L9 678 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 TMCO4Q5TGY1 634 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 ESRP1Q6NXG1 681 aaKnown RBP16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 HIC2Q96JB3 615 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 BPIFA3Q9BQP9 254 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 KLC2Q9H0B6 622 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 HSD3B7Q9H2F3 369 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 AP4E1Q9UPM8 1137 aa16.48■□□□□ 0.23
CTDSP1-204ENST00000443891 SMTNL1A8MU46 457 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 USP12O75317 370 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 PSMA2P25787 234 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 ITPKBP27987 946 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 POLR2LP62875 67 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 CDKN3Q16667 212 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 ISXQ2M1V0 245 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 DEFB133Q30KQ1 61 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 FILIP1LQ4L180 1135 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 TPRG1LQ5T0D9 272 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 FAXCQ5TGI0 409 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 RBM44Q6ZP01 1051 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 EFL1Q7Z2Z2 1120 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 LZTR1Q8N653 840 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 OR6C4Q8NGE1 309 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 DPH1Q9BZG8 443 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 EDEM3Q9BZQ6 932 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 ATP13A3Q9H7F0 1226 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 THSD1Q9NS62 852 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 AIPL1Q9NZN9 384 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 PCDHB1Q9Y5F3 818 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 PCDHGA8Q9Y5G5 932 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 NBEAQ8NFP9 2946 aa16.47■□□□□ 0.23
CTDSP1-204ENST00000443891 A0A1W2PQ67 120 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 A0A1W2PQC6 194 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 CPED1A4D0V7 1026 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 TMEM191CA6NGB0 347 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 DAPK3O43293 454 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 RASGRP1O95267 797 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 SERPINA4P29622 427 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 PRKCIP41743 596 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 RENBPP51606 427 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 HK3P52790 923 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 ADKP55263 362 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 GABREP78334 506 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 TLE3Q04726 772 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 MTM1Q13496 603 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 BROXQ5VW32 411 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 AFMIDQ63HM1 303 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 GUSBP11Q6P575 273 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 GPR155Q7Z3F1 870 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 SPOCK2Q92563 424 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 TRIM11Q96F44 468 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 CCDC97Q96F63 343 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 LGMNQ99538 433 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 LRRC61Q9BV99 259 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 PCDH12Q9NPG4 1184 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 MBNL1Q9NR56 388 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 KCTD5Q9NXV2 234 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 ATP8A1Q9Y2Q0 1164 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 SCINQ9Y6U3 715 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 MYLKQ15746 1914 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 CELSR3Q9NYQ7 3312 aa16.46■□□□□ 0.23
CTDSP1-204ENST00000443891 IGSF10Q6WRI0 2623 aa16.46■□□□□ 0.22
CTDSP1-204ENST00000443891 CAPN8A6NHC0 703 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 TMX2-CTNND1H3BSU7 103 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 ATXN7O15265 892 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 YY2O15391 372 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 INSIG1O15503 277 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 PRPSAP2O60256 369 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 GCATO75600 419 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 PALMO75781 387 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 PIGNO95427 931 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 HOXC4P09017 264 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 MYBL1P10243 752 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 C6P13671 934 aa16.45■□□□□ 0.22
CTDSP1-204ENST00000443891 TSHRP16473 764 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms