RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 DAB2P98082 770 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 ZNF211Q13398 564 aaPredicted RBP20.27■□□□□ 0.84
LRCH3-208ENST00000443727 FZD2Q14332 565 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 ZNF235Q14590 738 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 UGP2Q16851 508 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 TMCO4Q5TGY1 634 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 TXNRD3NBQ6F5E7 133 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 PARGQ86W56 976 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 RNF214Q8ND24 703 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 ZNF564Q8TBZ8 553 aaPredicted RBP20.27■□□□□ 0.84
LRCH3-208ENST00000443727 CTNNBL1Q8WYA6 563 aaPredicted RBP20.27■□□□□ 0.84
LRCH3-208ENST00000443727 PCDH12Q9NPG4 1184 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 COL5A1P20908 1838 aaPredicted RBP20.26■□□□□ 0.83
LRCH3-208ENST00000443727 HNRNPH3P31942 346 aaKnown RBP20.26■□□□□ 0.83
LRCH3-208ENST00000443727 SERPINB6P35237 376 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 HNF1BP35680 557 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 GJC1P36383 396 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 RGRP47804 291 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 SCNN1BP51168 640 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 CDH6P55285 790 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 SLC25A11Q02978 314 aaKnown RBP20.26■□□□□ 0.83
LRCH3-208ENST00000443727 BCL2L1Q07817 233 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 PTK2BQ14289 1009 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 LBRQ14739 615 aaKnown RBP20.26■□□□□ 0.83
LRCH3-208ENST00000443727 SMAD1Q15797 465 aaKnown RBP20.26■□□□□ 0.83
LRCH3-208ENST00000443727 TMEM52BQ4KMG9 183 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 TMPRSS12Q86WS5 348 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 MARCH9Q86YJ5 346 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 TP53INP2Q8IXH6 220 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 OR4C6Q8NH72 309 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 NSMCE1Q8WV22 266 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 CENPTQ96BT3 561 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 ZNF599Q96NL3 588 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 PCDH18Q9HCL0 1135 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 ETNK2Q9NVF9 386 aa20.26■□□□□ 0.83
LRCH3-208ENST00000443727 TSPAN11A1L157 253 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 AKR1B10O60218 316 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 CSF2P04141 144 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 H2AFZP0C0S5 128 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 JUPP14923 745 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 PFN3P60673 137 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 AP1S1P61966 158 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 NSUN2Q08J23 767 aaKnown RBP eCLIP20.25■□□□□ 0.83
LRCH3-208ENST00000443727 SLC18A3Q16572 532 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 H2AFVQ71UI9 128 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 BBS5Q8N3I7 341 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 ATPAF2Q8N5M1 289 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 TSC1Q92574 1164 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 PSKH2Q96QS6 385 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 CCDC86Q9H6F5 360 aaKnown RBP20.25■□□□□ 0.83
LRCH3-208ENST00000443727 GPR27Q9NS67 375 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 UVRAGQ9P2Y5 699 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 ATP8A1Q9Y2Q0 1164 aa20.25■□□□□ 0.83
LRCH3-208ENST00000443727 RIOK3O14730 519 aaKnown RBP20.24■□□□□ 0.83
LRCH3-208ENST00000443727 LZTS3O60299 673 aaPredicted RBP20.24■□□□□ 0.83
LRCH3-208ENST00000443727 PRKCGP05129 697 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 NME1P15531 152 aaKnown RBP20.24■□□□□ 0.83
LRCH3-208ENST00000443727 JUNDP17535 347 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 IGFALSP35858 605 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 POLR2LP62875 67 aaKnown RBP20.24■□□□□ 0.83
LRCH3-208ENST00000443727 SLC10A7Q0GE19 358 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 ILKQ13418 452 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 LRRC14Q15048 493 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 PROX2Q3B8N5 592 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 KDM7AQ6ZMT4 941 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 KCTD6Q8NC69 237 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 DNAJC7Q99615 494 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 CAAP1Q9H8G2 361 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 MBNL1Q9NR56 388 aaKnown RBP20.24■□□□□ 0.83
LRCH3-208ENST00000443727 NLGN3Q9NZ94 848 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 RCOR3Q9P2K3 495 aaPredicted RBP20.24■□□□□ 0.83
LRCH3-208ENST00000443727 COQ6Q9Y2Z9 468 aa20.24■□□□□ 0.83
LRCH3-208ENST00000443727 SCAMP1O15126 338 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 MUSKO15146 869 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 C6P13671 934 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 HSPA9P38646 679 aaKnown RBP20.23■□□□□ 0.83
LRCH3-208ENST00000443727 LIG3P49916 1009 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 YPEL5P62699 121 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 SEMG2Q02383 582 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 IRF4Q15306 451 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 TPRG1LQ5T0D9 272 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 ZFYVE27Q5T4F4 411 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 VSTM4Q8IW00 320 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 ZNF548Q8NEK5 533 aaPredicted RBP20.23■□□□□ 0.83
LRCH3-208ENST00000443727 LMX1AQ8TE12 382 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 DUSP23Q9BVJ7 150 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 PACSIN1Q9BY11 444 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 SCUBE2Q9NQ36 999 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 EVA1BQ9NVM1 165 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 LCMT1Q9UIC8 334 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 NENFQ9UMX5 172 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 SPEGQ15772 3267 aa20.23■□□□□ 0.83
LRCH3-208ENST00000443727 ASPMQ8IZT6 3477 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.22■□□□□ 0.83
LRCH3-208ENST00000443727 SRRM3A6NNA2 597 aaPredicted RBP20.22■□□□□ 0.83
LRCH3-208ENST00000443727 TMEM110-MUSTN1A8MSY1 372 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 TOR1BO14657 336 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 NEBLO76041 1014 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 PROSCO94903 275 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 ACP1P24666 158 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms