RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PRLRP16471 622 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 ZFXP17010 805 aaPredicted RBP12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 MX2P20592 715 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 CD27P26842 260 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 MMP12P39900 470 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 SKOR1P84550 965 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 OTUD4Q01804 1114 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 TFDP2Q14188 446 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 PDK1Q15118 436 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 TIGD7Q6NT04 549 aaPredicted RBP12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 PRPF39Q86UA1 669 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 ZC3H18Q86VM9 953 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 HORMAD1Q86X24 394 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 SYCE1Q8N0S2 351 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 TMEM145Q8NBT3 493 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 CCNYQ8ND76 341 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 SNX19Q92543 992 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 PPP1R16AQ96I34 528 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 KLF6Q99612 283 aaPredicted RBP12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 FZD3Q9NPG1 666 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 PCDH12Q9NPG4 1184 aa12.96□□□□□ -0.33
PDLIM2-212ENST00000443561 TBC1D3DA0A087WVF3 549 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3IA0A087WXS9 549 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3EA0A087X179 549 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3KA0A087X1G2 549 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3FA6NER0 549 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 LRRC72A6NJI9 287 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3LB9A6J9 549 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 H0Y8X5 98 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 SOCS5O75159 536 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 SERPINF2P08697 491 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3HP0C7X1 549 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 LHCGRP22888 699 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 HOXD12P35452 270 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 NR2C2P49116 596 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 RENBPP51606 427 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 AP1B1Q10567 949 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 UGP2Q16851 508 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TPRG1LQ5T0D9 272 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3GQ6DHY5 549 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3CQ6IPX1 549 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 GCNT7Q6ZNI0 430 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 RGL4Q8IZJ4 473 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TBC1D3Q8IZP1 549 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TXLNBQ8N3L3 684 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 PIH1D2Q8WWB5 315 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 ZNF641Q96N77 438 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TRIB3Q96RU7 358 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 HINFPQ9BQA5 517 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 C1QTNF2Q9BXJ5 285 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 MAK16Q9BXY0 300 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 MIR1-1HGQ9H1L0 117 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 ATP13A3Q9H7F0 1226 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDLIM2-212ENST00000443561 TDRD6O60522 2096 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 ZNF106Q9H2Y7 1883 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 A0A1B0GTW7 788 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 A0A1B0GVT2 93 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 IGLON5A6NGN9 336 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 PPP1R12AO14974 1030 aaPredicted RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 PGLSO95336 258 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 ENGP17813 658 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 RBL1P28749 1068 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 CSNK1EP49674 416 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 BCL2L1Q07817 233 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 GRIK2Q13002 908 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 DUOXA1Q1HG43 343 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 TMEM52BQ4KMG9 183 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC45A4Q5BKX6 768 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 WDR45BQ5MNZ6 344 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 FBXL19Q6PCT2 694 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 SPATS2Q86XZ4 545 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 ZNF567Q8N184 647 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 PELI3Q8N2H9 469 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 HCAR2Q8TDS4 363 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 P3H4Q92791 437 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 OXNAD1Q96HP4 312 aaPredicted RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 MYOCQ99972 504 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 TDRD1Q9BXT4 1180 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 POLR1EQ9GZS1 481 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 IL21RQ9HBE5 538 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 USP29Q9HBJ7 922 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 DYRK4Q9NR20 520 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 GPR27Q9NS67 375 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 AMACRQ9UHK6 382 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 COQ6Q9Y2Z9 468 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 PPIL1Q9Y3C6 166 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 SPTBN4Q9H254 2564 aa12.94□□□□□ -0.34
PDLIM2-212ENST00000443561 ARID1BQ8NFD5 2236 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 CABIN1Q9Y6J0 2220 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 NPIPB15A6NHN6 443 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 F5H423 210 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 BCAT2O15382 392 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC31A1O15431 190 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms