RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 LRRC72A6NJI9 287 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 F5H423 210 aaPredicted RBP16.16■□□□□ 0.18
USP39-205ENST00000442708 AREL1O15033 823 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 MTSS1O43312 755 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 LIASO43766 372 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 NEBLO76041 1014 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 FSBPO95073 299 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 PDHA1P08559 390 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 CD86P42081 329 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 UGP2Q16851 508 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 RALGPS1Q5JS13 557 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 LYSMD4Q5XG99 296 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 TTC7BQ86TV6 843 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 CDKL3Q8IVW4 592 aaPredicted RBP16.16■□□□□ 0.18
USP39-205ENST00000442708 RASGEF1CQ8N431 466 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 DCLK2Q8N568 766 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 SPATA22Q8NHS9 363 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 HCAR2Q8TDS4 363 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 TADA1Q96BN2 335 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 IMP4Q96G21 291 aaKnown RBP16.16■□□□□ 0.18
USP39-205ENST00000442708 LOXL4Q96JB6 756 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 SMIM14Q96QK8 99 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 OSBPL9Q96SU4 736 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 RBM15Q96T37 977 aaKnown RBP eCLIP16.16■□□□□ 0.18
USP39-205ENST00000442708 GORASP1Q9BQQ3 440 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 PCED1AQ9H1Q7 454 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 ARRDC1-AS1Q9H2J1 176 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 KDM4CQ9H3R0 1056 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 PREBQ9HCU5 417 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 PCDH12Q9NPG4 1184 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 SNX12Q9UMY4 172 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 RAI2Q9Y5P3 530 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 LAMA1P25391 3075 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 TRPM6Q9BX84 2022 aa16.16■□□□□ 0.18
USP39-205ENST00000442708 UPK3BL1B0FP48 263 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 UPK3BL2E5RIL1 263 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 ZNF185O15231 689 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 KCNN4O15554 427 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 AP1G1O43747 822 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 FZD6O60353 706 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 RNGTTO60942 597 aaKnown RBP16.15■□□□□ 0.18
USP39-205ENST00000442708 SOCS5O75159 536 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 MT-CYBP00156 380 aaPredicted RBP16.15■□□□□ 0.18
USP39-205ENST00000442708 PRLP01236 227 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 NFKB1P19838 968 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 GDF10P55107 478 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 CREB5Q02930 508 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 SNX1Q13596 522 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 OASLQ15646 514 aaKnown RBP16.15■□□□□ 0.18
USP39-205ENST00000442708 SEL1L3Q68CR1 1132 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 BRAT1Q6PJG6 821 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 PID1Q7Z2X4 250 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 C1orf216Q8TAB5 229 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 PDCD6IPQ8WUM4 868 aaKnown RBP16.15■□□□□ 0.18
USP39-205ENST00000442708 DNASE2BQ8WZ79 361 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 KLK6Q92876 244 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 FOXJ1Q92949 421 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 PBKQ96KB5 322 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 TMEM121Q9BTD3 319 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 SLC25A51Q9H1U9 297 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 SMOC1Q9H4F8 434 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 EIF2B4Q9UI10 523 aaKnown RBP16.15■□□□□ 0.18
USP39-205ENST00000442708 PILRBQ9UKJ0 227 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 CHKBQ9Y259 395 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 PCDHB9Q9Y5E1 797 aa16.15■□□□□ 0.18
USP39-205ENST00000442708 A0A1W2PQU0 124 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 MEI4A8MW99 385 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 WNT9AO14904 365 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 LATO43561 262 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 PGLSO95336 258 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 RETP07949 1114 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 SERPINF2P08697 491 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 CES1P23141 567 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 MSNP26038 577 aaKnown RBP16.14■□□□□ 0.17
USP39-205ENST00000442708 MAT2AP31153 395 aaKnown RBP16.14■□□□□ 0.17
USP39-205ENST00000442708 CCR5P51681 352 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 FGL2Q14314 439 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 LONRF2Q1L5Z9 754 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 ZNF284Q2VY69 593 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 TMEM259Q4ZIN3 620 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 ANKRD20A2Q5SQ80 823 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 ANKRD20A1Q5TYW2 823 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 ANKRD20A3Q5VUR7 823 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 CYP2U1Q7Z449 544 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 TRIM69Q86WT6 500 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 FAM71DQ8N9W8 422 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 CCDC110Q8TBZ0 833 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 PIH1D2Q8WWB5 315 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 SNX19Q92543 992 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 PIGKQ92643 395 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 RAB7BQ96AH8 199 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 VAT1Q99536 393 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 TDRD1Q9BXT4 1180 aaKnown RBP16.14■□□□□ 0.17
USP39-205ENST00000442708 PARD6AQ9NPB6 346 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 UBP1Q9NZI7 540 aa16.14■□□□□ 0.17
USP39-205ENST00000442708 KLHL8Q9P2G9 620 aaPredicted RBP16.14■□□□□ 0.17
USP39-205ENST00000442708 ADAMTS9Q9P2N4 1935 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 PI4KAP42356 2102 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 A0A0U1RQS6 177 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms