RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZZEF1O43149 2961 aa19.11■□□□□ 0.65
HMGB3P22-201ENST00000442010 TM7SF2O76062 418 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 IL4RP24394 825 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 IGFALSP35858 605 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 ARL4AP40617 200 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZNF211Q13398 564 aaPredicted RBP19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 CAMK2BQ13554 666 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 SPECC1LQ69YQ0 1117 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 MARCH9Q86YJ5 346 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 CAMK1DQ8IU85 385 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 GALNT15Q8N3T1 639 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 TP53I13Q8NBR0 393 aaPredicted RBP19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZCCHC14Q8WYQ9 949 aaKnown RBP19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 ECHDC3Q96DC8 303 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 PSKH2Q96QS6 385 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 KLF15Q9UIH9 416 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 CFAP47Q6ZTR5 3102 aa19.1■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZFHX4Q86UP3 3567 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 MYO1FO00160 1098 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 TAF4O00268 1085 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 RIOK3O14730 519 aaKnown RBP19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 SIGLEC6O43699 453 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 RFPL3O75679 317 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 CSF2P04141 144 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 NME1P15531 152 aaKnown RBP19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 CKMT2P17540 419 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 ARSEP51690 589 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 SLC10A7Q0GE19 358 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 ELP6Q0PNE2 266 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 SLC18A3Q16572 532 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZNF542PQ5EBM4 170 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 BRAT1Q6PJG6 821 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 TMCO3Q6UWJ1 677 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 CPNE8Q86YQ8 564 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 VSTM4Q8IW00 320 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 OR8K1Q8NGG5 319 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 OR4C6Q8NH72 309 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZNF564Q8TBZ8 553 aaPredicted RBP19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 CXorf40AQ8TE69 158 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 ZNF599Q96NL3 588 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 CINPQ9BW66 212 aaPredicted RBP19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 PACSIN1Q9BY11 444 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 TSPY26PQ9H489 355 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 PCDH12Q9NPG4 1184 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 MBNL1Q9NR56 388 aaKnown RBP19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 RP1P56715 2156 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 PKD1L2Q7Z442 2459 aa19.09■□□□□ 0.65
HMGB3P22-201ENST00000442010 ANKRD11Q6UB99 2663 aaPredicted RBP19.08■□□□□ 0.65
HMGB3P22-201ENST00000442010 TRAFD1O14545 582 aaPredicted RBP19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 CBFA2T2O43439 604 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 MAFKO60675 156 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 CDK4P11802 303 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 CR2P20023 1033 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 ACP1P24666 158 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 EIF2B5Q13144 721 aaKnown RBP19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 PDE1CQ14123 709 aaPredicted RBP19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 TRIM14Q14142 442 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 LBRQ14739 615 aaKnown RBP19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 CCDC157Q569K6 752 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 TMCO4Q5TGY1 634 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 PARGQ86W56 976 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 WRAP53Q9BUR4 548 aaKnown RBP19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 DNAJC28Q9NX36 388 aa19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 RCOR3Q9P2K3 495 aaPredicted RBP19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 PNMA8BQ9ULN7 279 aaPredicted RBP19.08■□□□□ 0.64
HMGB3P22-201ENST00000442010 SSU72P8A0A1W2PR75 194 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 FAM149AA5PLN7 773 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 CD48P09326 243 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 MMP12P39900 470 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 HNRNPKP61978 463 aaKnown RBP eCLIP19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 ILKQ13418 452 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 AGERQ15109 404 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 TMPRSS12Q86WS5 348 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 PGBD5Q8N414 524 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 SPOCK2Q92563 424 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 ATP13A3Q9H7F0 1226 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 UVRAGQ9P2Y5 699 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 SEPT3Q9UH03 358 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 ATP8A1Q9Y2Q0 1164 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 COQ6Q9Y2Z9 468 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 CELSR3Q9NYQ7 3312 aa19.07■□□□□ 0.64
HMGB3P22-201ENST00000442010 LAMA5O15230 3695 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 COL27A1Q8IZC6 1860 aaPredicted RBP19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 LY6G6EA0A0G2JKS1 128 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 SRRM3A6NNA2 597 aaPredicted RBP19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 TOR1BO14657 336 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 SCAMP1O15126 338 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 PROSCO94903 275 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 H2AFZP0C0S5 128 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 C6P13671 934 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 XPAP23025 273 aaPredicted RBP19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 SERPINA4P29622 427 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 SCNN1BP51168 640 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 RENBPP51606 427 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 CDH6P55285 790 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 AP1S1P61966 158 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 YPEL5P62699 121 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 RALGDSQ12967 914 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 MMRN1Q13201 1228 aa19.06■□□□□ 0.64
HMGB3P22-201ENST00000442010 IRF4Q15306 451 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms