RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TRIM42Q8IWZ5 723 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 NELFCDQ8IXH7 590 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SYCE1Q8N0S2 351 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 KIF2BQ8N4N8 673 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 FITM2Q8N6M3 262 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 LRRC57Q8N9N7 239 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 FAM13CQ8NE31 585 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 OR4C6Q8NH72 309 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 CXorf38Q8TB03 319 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 IFI44Q8TCB0 444 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 KBTBD7Q8WVZ9 684 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 MIB2Q96AX9 1013 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 PCED1BQ96HM7 432 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 MAGEB18Q96M61 343 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 RUNDC3BQ96NL0 473 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SERPINB12Q96P63 405 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 NUDCD1Q96RS6 583 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 REEP2Q9BRK0 252 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ERP44Q9BS26 406 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 DPH5Q9H2P9 285 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 PARVGQ9HBI0 331 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 METTL14Q9HCE5 456 aaKnown RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SAR1AQ9NR31 198 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ELOVL2Q9NXB9 296 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 AGO2Q9UKV8 859 aaKnown RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ITGA11Q9UKX5 1188 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 VPS4AQ9UN37 437 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 MAPK8IP1Q9UQF2 711 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 TBC1D30Q9Y2I9 924 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SLC27A6Q9Y2P4 619 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 PCDHB11Q9Y5F2 797 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ENTPD2Q9Y5L3 495 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SNX9Q9Y5X1 595 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ZFC3H1O60293 1989 aaKnown RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 NPHP3-ACAD11A0A0J9YXS1 232 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 A0A1W2PNU3 283 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TCP11X1B4DZS4 312 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TISP43B9A030 160 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 RASGRF2O14827 1237 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 EPHB6O15197 1021 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 MTSS1O43312 755 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TCEA3O75764 348 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 GFPT2O94808 682 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TMCC1O94876 653 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TJP3O95049 919 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 PDHA1P08559 390 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 PLA2G4BP0C869 781 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 FAM200BP0CF97 657 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 LIPCP11150 499 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 PIM1P11309 404 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 RARGP13631 454 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 IDO1P14902 403 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 WARSP23381 471 aaKnown RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 CD97P48960 835 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 CLCN2P51788 898 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 RPS14P62263 151 aaKnown RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 CYP4F2P78329 520 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 RBP5P82980 135 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TFAMQ00059 246 aaKnown RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 LRRC63Q05C16 580 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 AP1B1Q10567 949 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 KCNMA1Q12791 1236 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 ITGA9Q13797 1035 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 AUHQ13825 339 aaKnown RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TGIF1Q15583 401 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 MUM1Q2TAK8 710 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 DTHD1Q6ZMT9 781 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TRMT10CQ7L0Y3 403 aaKnown RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 HS2ST1Q7LGA3 356 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 VASH2Q86V25 355 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 EFCAB3Q8N7B9 438 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TPCN2Q8NHX9 752 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 C9orf43Q8TAL5 461 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 WBP2Q969T9 261 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 ARRDC3Q96B67 414 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 PRR11Q96HE9 360 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 AK8Q96MA6 479 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 OLFM3Q96PB7 478 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 FIZ1Q96SL8 496 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 SPATA16Q9BXB7 569 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 ELOVL4Q9GZR5 314 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 EPB41L1Q9H4G0 881 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 CCSER2Q9H7U1 834 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 SYNDIG1Q9H7V2 258 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 USP29Q9HBJ7 922 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 ETNK1Q9HBU6 452 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF71Q9NQZ8 489 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 CUEDC1Q9NWM3 386 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 FBXL12Q9NXK8 326 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 GALNT8Q9NY28 637 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 DKK3Q9UBP4 350 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 MTRF1LQ9UGC7 380 aaKnown RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 CHORDC1Q9UHD1 332 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-210ENST00000441703 LNPEPQ9UIQ6 1025 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 RASAL2Q9UJF2 1139 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 TUBD1Q9UJT1 453 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 ITGB1BP2Q9UKP3 347 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 ZNF232Q9UNY5 417 aa6.58□□□□□ -1.36
HDAC6-210ENST00000441703 PLA2G4CQ9UP65 541 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms