RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 USP29Q9HBJ7 922 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 MBNL1Q9NR56 388 aaKnown RBP16.98■□□□□ 0.31
COL16A1-204ENST00000440437 IPO11Q9UI26 975 aaKnown RBP16.98■□□□□ 0.31
COL16A1-204ENST00000440437 SHROOM3Q8TF72 1996 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 TOR1BO14657 336 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 BUB1BO60566 1050 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 MT-CO3P00414 261 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 SERPINC1P01008 464 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 GP1BAP07359 652 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 MYBL1P10243 752 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 PBX1P40424 430 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 CSNK1DP48730 415 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 HCAR3P49019 387 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 ZNF135P52742 658 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 DPYSQ14117 519 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 PTK2BQ14289 1009 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 IRF4Q15306 451 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 UGP2Q16851 508 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 CDCP2Q5VXM1 449 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 HGSNATQ68CP4 663 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 ZCCHC8Q6NZY4 707 aaKnown RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 MACC1Q6ZN28 852 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 ARHGAP36Q6ZRI8 547 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 RBFAQ8N0V3 343 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 TSEN2Q8NCE0 465 aaKnown RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 HNRNPLLQ8WVV9 542 aaKnown RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 TRIM11Q96F44 468 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 TBATAQ96M53 351 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 ZNF641Q96N77 438 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 TUBGCP5Q96RT8 1024 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 C1QTNF7Q9BXJ2 289 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 TCEAL2Q9H3H9 227 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 CWC15Q9P013 229 aaKnown RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 APOBEC3BQ9UH17 382 aaKnown RBP16.97■□□□□ 0.31
COL16A1-204ENST00000440437 COQ6Q9Y2Z9 468 aa16.97■□□□□ 0.31
COL16A1-204ENST00000440437 CACNA1GO43497 2377 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 ASXL3Q9C0F0 2248 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 RIOK3O14730 519 aaKnown RBP16.96■□□□□ 0.31
COL16A1-204ENST00000440437 DAPK3O43293 454 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 TLX3O43711 291 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-204ENST00000440437 OPA1O60313 960 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 C6P13671 934 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 HOXB3P14651 431 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-204ENST00000440437 XPAP23025 273 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-204ENST00000440437 IL1R2P27930 398 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 PCK1P35558 622 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 MMP12P39900 470 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 DUSP3P51452 185 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-204ENST00000440437 THOP1P52888 689 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 ACAP1Q15027 740 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 AGERQ15109 404 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 PPP6R3Q5H9R7 873 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-204ENST00000440437 BRAT1Q6PJG6 821 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 PHACTR4Q8IZ21 702 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 LMX1AQ8TE12 382 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 BTN2A2Q8WVV5 523 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 LRRC61Q9BV99 259 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 CBX8Q9HC52 389 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 MRPL47Q9HD33 250 aaKnown RBP16.96■□□□□ 0.31
COL16A1-204ENST00000440437 PCDH12Q9NPG4 1184 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 MYO1AQ9UBC5 1043 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 LOC400499M0QZD8 3231 aa16.96■□□□□ 0.31
COL16A1-204ENST00000440437 A0A1W2PQJ5 194 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 SYCE3A1L190 88 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 TPP1O14773 563 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 MUSKO15146 869 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 LZTS3O60299 673 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-204ENST00000440437 GCATO75600 419 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 PALMO75781 387 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 TCF4P15884 667 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 EIF4A3P38919 411 aaKnown RBP16.95■□□□□ 0.3
COL16A1-204ENST00000440437 FANCCQ00597 558 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 IL10RBQ08334 325 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 RFTN1Q14699 578 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-204ENST00000440437 DPYSL2Q16555 572 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 WSCD2Q2TBF2 565 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 DEFB133Q30KQ1 61 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 SRLQ86TD4 932 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 PDZD3Q86UT5 571 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 CAMK1DQ8IU85 385 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 TP53INP2Q8IXH6 220 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 IFI44Q8TCB0 444 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 ECHDC3Q96DC8 303 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 CINPQ9BW66 212 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-204ENST00000440437 SP110Q9HB58 689 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 EVA1BQ9NVM1 165 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 SPASTQ9UBP0 616 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 SALL4Q9UJQ4 1053 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 ATP8A1Q9Y2Q0 1164 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 AK5Q9Y6K8 562 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 RP1P56715 2156 aa16.95■□□□□ 0.3
COL16A1-204ENST00000440437 DFFAO00273 331 aa16.94■□□□□ 0.3
COL16A1-204ENST00000440437 SERPINA4P29622 427 aa16.94■□□□□ 0.3
COL16A1-204ENST00000440437 SEMG2Q02383 582 aa16.94■□□□□ 0.3
COL16A1-204ENST00000440437 NSUN2Q08J23 767 aaKnown RBP eCLIP16.94■□□□□ 0.3
COL16A1-204ENST00000440437 RALGDSQ12967 914 aa16.94■□□□□ 0.3
COL16A1-204ENST00000440437 LRRC14Q15048 493 aa16.94■□□□□ 0.3
COL16A1-204ENST00000440437 SMTNL2Q2TAL5 461 aa16.94■□□□□ 0.3
COL16A1-204ENST00000440437 TDRD12Q587J7 1177 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms