RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 NCAPGQ9BPX3 1015 aa20.97■□□□□ 0.95
CPNE1-219ENST00000440240 WRAP53Q9BUR4 548 aaKnown RBP20.97■□□□□ 0.95
CPNE1-219ENST00000440240 MBNL1Q9NR56 388 aaKnown RBP20.97■□□□□ 0.95
CPNE1-219ENST00000440240 GCN1Q92616 2671 aaKnown RBP20.96■□□□□ 0.95
CPNE1-219ENST00000440240 GCATO75600 419 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 TCEA3O75764 348 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 FERP16591 822 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 ITIH2P19823 946 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 C19orf57Q0VDD7 668 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 C1orf61Q13536 156 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 LRRC14Q15048 493 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 CYTH1Q15438 398 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 C6orf132Q5T0Z8 1188 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 BROXQ5VW32 411 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 ESRP1Q6NXG1 681 aaKnown RBP20.96■□□□□ 0.95
CPNE1-219ENST00000440240 PPP1R2P3Q6NXS1 205 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 IGF2-ASQ6U949 168 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 DNAAF5Q86Y56 855 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 MCOLN2Q8IZK6 566 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 TP53I13Q8NBR0 393 aaPredicted RBP20.96■□□□□ 0.95
CPNE1-219ENST00000440240 NETO2Q8NC67 525 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 SCG3Q8WXD2 468 aaKnown RBP20.96■□□□□ 0.95
CPNE1-219ENST00000440240 VCPIP1Q96JH7 1222 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 ZNF641Q96N77 438 aaPredicted RBP20.96■□□□□ 0.95
CPNE1-219ENST00000440240 TCEAL2Q9H3H9 227 aaPredicted RBP20.96■□□□□ 0.95
CPNE1-219ENST00000440240 SUV39H2Q9H5I1 410 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 THSD1Q9NS62 852 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 UBA2Q9UBT2 640 aaPredicted RBP20.96■□□□□ 0.95
CPNE1-219ENST00000440240 SHROOM3Q8TF72 1996 aa20.96■□□□□ 0.95
CPNE1-219ENST00000440240 EIF3CLB5ME19 914 aaKnown RBP20.95■□□□□ 0.94
CPNE1-219ENST00000440240 YY2O15391 372 aa20.95■□□□□ 0.94
CPNE1-219ENST00000440240 HTR1BP28222 390 aa20.95■□□□□ 0.94
CPNE1-219ENST00000440240 NDST2P52849 883 aa20.95■□□□□ 0.94
CPNE1-219ENST00000440240 UCNP55089 124 aa20.95■□□□□ 0.94
CPNE1-219ENST00000440240 UGP2Q16851 508 aa20.95■□□□□ 0.94
CPNE1-219ENST00000440240 RBM44Q6ZP01 1051 aaKnown RBP20.95■□□□□ 0.94
CPNE1-219ENST00000440240 SDR16C5Q8N3Y7 309 aa20.95■□□□□ 0.94
CPNE1-219ENST00000440240 FSTL5Q8N475 847 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-219ENST00000440240 NAF1Q96HR8 494 aaKnown RBP20.95■□□□□ 0.94
CPNE1-219ENST00000440240 EIF3CQ99613 913 aaKnown RBP20.95■□□□□ 0.94
CPNE1-219ENST00000440240 LRRC61Q9BV99 259 aa20.95■□□□□ 0.94
CPNE1-219ENST00000440240 LHX3Q9UBR4 397 aa20.95■□□□□ 0.94
CPNE1-219ENST00000440240 KALRNO60229 2985 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 MUSKO15146 869 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 INSIG1O15503 277 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 TSHRP16473 764 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 RBMS1P29558 406 aaKnown RBP20.94■□□□□ 0.94
CPNE1-219ENST00000440240 TPI1P60174 286 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 CXADRP78310 365 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 ELOCQ15369 112 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 STX1AQ16623 288 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 CFAP58Q5T655 872 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 ERAP2Q6P179 960 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 BRAT1Q6PJG6 821 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 LVRNQ6Q4G3 990 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 SLC35F3Q8IY50 421 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 EXOC2Q96KP1 924 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 DPH1Q9BZG8 443 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 CLPBQ9H078 707 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 LRRC19Q9H756 370 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 PARVAQ9NVD7 372 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 PNMA8BQ9ULN7 279 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-219ENST00000440240 PADI4Q9UM07 663 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 DOLKQ9UPQ8 538 aa20.94■□□□□ 0.94
CPNE1-219ENST00000440240 HELZ2Q9BYK8 2649 aaKnown RBP20.93■□□□□ 0.94
CPNE1-219ENST00000440240 TSPAN11A1L157 253 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 PRAMEF11O60813 436 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 PIGNO95427 931 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 ALPIP09923 528 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 CTSEP14091 401 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 TNFAIP3P21580 790 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 CSNK1DP48730 415 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 HK3P52790 923 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 IRF4Q15306 451 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 WSCD2Q2TBF2 565 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 IRF2BP2Q7Z5L9 587 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 ATL2Q8NHH9 583 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 SLC46A1Q96NT5 459 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 GBP4Q96PP9 640 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 TUBGCP5Q96RT8 1024 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 PDFQ9HBH1 243 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 ASCL3Q9NQ33 180 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 SATB2Q9UPW6 733 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 PCDHGA8Q9Y5G5 932 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 ENTPD2Q9Y5L3 495 aa20.93■□□□□ 0.94
CPNE1-219ENST00000440240 ARHGAP42A6NI28 874 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 J3KR12 359 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 RASGRP1O95267 797 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 TMPRSS3P57727 454 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 AGERQ15109 404 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 C3orf38Q5JPI3 329 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 PERM1Q5SV97 790 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 APTXQ7Z2E3 356 aaKnown RBP20.92■□□□□ 0.94
CPNE1-219ENST00000440240 HID1Q8IV36 788 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 KCNE4Q8WWG9 221 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 ATXN7L3BQ96GX2 97 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 PCDH12Q9NPG4 1184 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 MYO6Q9UM54 1294 aa20.92■□□□□ 0.94
CPNE1-219ENST00000440240 MGAQ8IWI9 3026 aa20.91■□□□□ 0.94
CPNE1-219ENST00000440240 CFAP69A5D8W1 941 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms